RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 SPDYCQ5MJ68 293 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 C6orf118Q5T5N4 469 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 TMEM270Q6UE05 265 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 SPRED2Q7Z698 418 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 SESTD1Q86VW0 696 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 PALB2Q86YC2 1186 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 TMEM35BQ8NCS4 154 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.78□□□□□ -1.16
VPS45-209ENST00000491789 WNT8BQ93098 351 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 LRRC45Q96CN5 670 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 SCLT1Q96NL6 688 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 KRT12Q99456 494 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 GCOM2Q9BZD3 368 aaPredicted RBP7.78□□□□□ -1.16
VPS45-209ENST00000491789 MTMR12Q9C0I1 747 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 EPC1Q9H2F5 836 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 RNPEPQ9H4A4 650 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 ZFAND3Q9H8U3 227 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 CERS4Q9HA82 394 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 IFT122Q9HBG6 1241 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 OSGEPQ9NPF4 335 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 HOMER3Q9NSC5 361 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 TAS2R14Q9NYV8 317 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 PARP2Q9UGN5 583 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 ITGA11Q9UKX5 1188 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 KIAA1257Q9ULG3 409 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 MAP4K5Q9Y4K4 846 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 PCDHA11Q9Y5I1 949 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 PTPRJQ12913 1337 aa7.78□□□□□ -1.16
VPS45-209ENST00000491789 CHD7Q9P2D1 2997 aa7.77□□□□□ -1.16
VPS45-209ENST00000491789 MUC3AQ02505 3323 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 NLRC5Q86WI3 1866 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 COL4A4P53420 1690 aaPredicted RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 SMIM35A0A1B0GVV1 85 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 MYO1FO00160 1098 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 NDC80O14777 642 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 THAP12O43422 761 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 XPOTO43592 962 aaKnown RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 OPA1O60313 960 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 SASH3O75995 380 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 FGGP02679 453 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 CA3P07451 260 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 PFKMP08237 780 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 ATP2A2P16615 1042 aaKnown RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 COMTP21964 271 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 EIF4BP23588 611 aaKnown RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 FNTAP49354 379 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 DNA2P51530 1060 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 GSCP56915 257 aaPredicted RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 NOMO3P69849 1222 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 RBP5P82980 135 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 CBX1P83916 185 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 ZNF200P98182 395 aaPredicted RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 MTMR3Q13615 1198 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 STILQ15468 1287 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 ZBTB41Q5SVQ8 909 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 PPP2R2DQ66LE6 453 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 PLEKHA7Q6IQ23 1121 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 SYDE1Q6ZW31 735 aaPredicted RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 MON1BQ7L1V2 547 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 TMCO2Q7Z6W1 182 aaPredicted RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 CCDC116Q8IYX3 515 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 NME8Q8N427 588 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 C12orf50Q8NA57 414 aaPredicted RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 OR5B17Q8NGF7 314 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 TRAPPC12Q8WVT3 735 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 CD101Q93033 1021 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 MS4A14Q96JA4 679 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 RUFY1Q96T51 708 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 PI4K2AQ9BTU6 479 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 C1QTNF2Q9BXJ5 285 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 BCO2Q9BYV7 579 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 MTIF3Q9H2K0 278 aaKnown RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 PDZD7Q9H5P4 517 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 APOBEC3GQ9HC16 384 aaKnown RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 PARVAQ9NVD7 372 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 ADAM22Q9P0K1 906 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 WDR35Q9P2L0 1181 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 IP6K2Q9UHH9 426 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 GTF2IRD1Q9UHL9 959 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 FEZ2Q9UHY8 353 aaPredicted RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 CDV3Q9UKY7 258 aaKnown RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 HPCAL4Q9UM19 191 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 PACSIN2Q9UNF0 486 aaPredicted RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 COG5Q9UP83 839 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 UTP11Q9Y3A2 253 aaKnown RBP7.77□□□□□ -1.17
VPS45-209ENST00000491789 NUB1Q9Y5A7 615 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 PCDHA3Q9Y5H8 950 aa7.77□□□□□ -1.17
VPS45-209ENST00000491789 ATG2AQ2TAZ0 1938 aa7.76□□□□□ -1.17
VPS45-209ENST00000491789 A0A087WZ62 844 aa7.76□□□□□ -1.17
VPS45-209ENST00000491789 A0A1B0GUA9 196 aa7.76□□□□□ -1.17
VPS45-209ENST00000491789 MBLAC1A4D2B0 266 aaPredicted RBP7.76□□□□□ -1.17
VPS45-209ENST00000491789 GOLGA6BA6NDN3 693 aa7.76□□□□□ -1.17
VPS45-209ENST00000491789 A6NNZ2 444 aa7.76□□□□□ -1.17
VPS45-209ENST00000491789 PODXLO00592 558 aa7.76□□□□□ -1.17
VPS45-209ENST00000491789 SART1O43290 800 aaKnown RBP7.76□□□□□ -1.17
VPS45-209ENST00000491789 RAD51CO43502 376 aa7.76□□□□□ -1.17
VPS45-209ENST00000491789 MAN1A2O60476 641 aa7.76□□□□□ -1.17
VPS45-209ENST00000491789 TSPAN1O60635 241 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms