RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 TRMT13Q9NUP7 481 aaKnown RBP5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 SYBUQ9NX95 663 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 ING1Q9UK53 422 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 TBC1D30Q9Y2I9 924 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 CCDC194A0A1B0GVG4 234 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 CCDC151A5D8V7 595 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 TLR5O60602 858 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 NXPH3O95157 252 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 RHOP08100 348 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 TXNP10599 105 aaKnown RBP5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 TPH1P17752 444 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 STT3AP46977 705 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 HNRNPMP52272 730 aaKnown RBP eCLIP5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 DGKEP52429 567 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 ITGA8P53708 1063 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 AK2P54819 239 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 DPTQ07507 201 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 ZNF543Q08ER8 600 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 ARHGEF7Q14155 803 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 PTPRRQ15256 657 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 ZDHHC24Q6UX98 284 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 MYD88Q99836 296 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 NAA15Q9BXJ9 866 aaKnown RBP5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 PCED1AQ9H1Q7 454 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 CHST8Q9H2A9 424 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 CXorf36Q9H7Y0 433 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 GLOD4Q9HC38 313 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 TBC1D23Q9NUY8 699 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 MID2Q9UJV3 735 aa5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 EPN1Q9Y6I3 576 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P38-201ENST00000490557 COL4A3Q01955 1670 aa5.9□□□□□ -1.47
HMGB1P38-201ENST00000490557 F8W8V4 182 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 H7C4K7 107 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 SLC16A3O15427 465 aaKnown RBP5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 CCP110O43303 1012 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 MT-ND5P03915 603 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 ANXA2P07355 339 aaKnown RBP5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 PDHA1P08559 390 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 KCNA3P22001 575 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 ACVR2AP27037 513 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 PRKAR1BP31321 381 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 CXCR5P32302 372 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 PTDSS1P48651 473 aaKnown RBP5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 BRD3Q15059 726 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 PLAC9Q5JTB6 97 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 ZNF618Q5T7W0 954 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 DEPDC1Q5TB30 811 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 DPP9Q86TI2 863 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 FAM109AQ8N4B1 249 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 ACRBPQ8NEB7 543 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 OSCP1Q8WVF1 389 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 CCDC138Q96M89 665 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 XPNPEP3Q9NQH7 507 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 STARD7Q9NQZ5 370 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 EHD3Q9NZN3 535 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 CCNL1Q9UK58 526 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 PHTF1Q9UMS5 762 aa5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 WDR33Q9C0J8 1336 aaKnown RBP5.89□□□□□ -1.47
HMGB1P38-201ENST00000490557 A0A087X1B8 175 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 AQP7P3A6NL99 342 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 AKAP8O43823 692 aaKnown RBP5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 SRGAP2O75044 1071 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 PIAS2O75928 621 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 NR2F6P10588 404 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 ZFXP17010 805 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 IL1R2P27930 398 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 MPLP40238 635 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 ALDH9A1P49189 494 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 MTHFSP49914 203 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 CPT1AP50416 773 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 CASP5P51878 434 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 FOXI1Q12951 378 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 CERCAMQ5T4B2 595 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 DTX2Q86UW9 622 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 LDLRAD3Q86YD5 345 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 CCDC150Q8NCX0 1101 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 ATG4AQ8WYN0 398 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 PBKQ96KB5 322 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 GBA2Q9HCG7 927 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 CEP83Q9Y592 693 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 CDY1Q9Y6F8 540 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 ADGRA2Q96PE1 1338 aa5.88□□□□□ -1.47
HMGB1P38-201ENST00000490557 ADM5C9JUS6 153 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 APOL1O14791 398 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 URI1O94763 535 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 TTLL1O95922 423 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 IL1R1P14778 569 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 PLA2G5P39877 138 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 PDE1AP54750 535 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 STK3Q13188 491 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 BMPR2Q13873 1038 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 CCNIQ14094 377 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 TXNRD1Q16881 649 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 ZIK1Q3SY52 487 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 SYCP2LQ5T4T6 812 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 KLHDC7AQ5VTJ3 777 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 Q6ZPA2 131 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 BEND5Q7L4P6 421 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 SRLQ86TD4 932 aa5.87□□□□□ -1.47
HMGB1P38-201ENST00000490557 PEG10Q86TG7 708 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms