RNA–Protein interactions for RNA: ENST00000488994.5

PNCK-231, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,437 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-231	ENST00000488994	LINC00271	P0C7V0	271 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	PLCB3	Q01970	1234 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	BTG3	Q14201	252 aa	Predicted RBP	19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	PKDCC	Q504Y2	493 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	SLC35F6	Q8N357	371 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	IPO4	Q8TEX9	1081 aa	Known RBP	19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	ZNF592	Q92610	1267 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	C18orf8	Q96DM3	657 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	YME1L1	Q96TA2	773 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	SYNC	Q9H7C4	482 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	AAAS	Q9NRG9	546 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	FAM49B	Q9NUQ9	324 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	STK39	Q9UEW8	545 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	INSL6	Q9Y581	213 aa		19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	19.52	■□□□□ 0.72
PNCK-231	ENST00000488994	BUB1	O43683	1085 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	LPXN	O60711	386 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	LAG3	P18627	525 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	SSTR3	P32745	418 aa	Predicted RBP	19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	ERVK-21	P61565	698 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	BST2	Q10589	180 aa	Known RBP	19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	PTP4A2	Q12974	167 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	SPOUT1	Q5T280	376 aa	Known RBP	19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	FUT10	Q6P4F1	479 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	MMS22L	Q6ZRQ5	1243 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	TPCN2	Q8NHX9	752 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	SLC2A14	Q8TDB8	520 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	ARHGEF26	Q96DR7	871 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	NAPG	Q99747	312 aa	Predicted RBP	19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	C11orf70	Q9BRQ4	267 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	CWH43	Q9H720	699 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	SALL4	Q9UJQ4	1053 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	MTCH2	Q9Y6C9	303 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	BRWD1	Q9NSI6	2320 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994		H7C4K7	107 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	FGFR3	P22607	806 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	RRM1	P23921	792 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	ACAT1	P24752	427 aa	Known RBP	19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	ACADSB	P45954	432 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	GABRB2	P47870	512 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	GSC	P56915	257 aa	Predicted RBP	19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	PDCL	Q13371	301 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	TUBB2A	Q13885	445 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	ZNF268	Q14587	947 aa	Predicted RBP	19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	INTS6L	Q5JSJ4	861 aa	Known RBP	19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	FAM171A1	Q5VUB5	890 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	PLEKHA7	Q6IQ23	1121 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	FAM171B	Q6P995	826 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	DNAAF5	Q86Y56	855 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	DCP1B	Q8IZD4	617 aa	Known RBP	19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	UBA3	Q8TBC4	463 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	SLC35F5	Q8WV83	523 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	ATXN2L	Q8WWM7	1075 aa	Known RBP	19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	ZNF558	Q96NG5	402 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	WDR24	Q96S15	920 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	ZBED2	Q9BTP6	218 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	TUBB2B	Q9BVA1	445 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	NUP85	Q9BW27	656 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	DUSP16	Q9BY84	665 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	MARCH5	Q9NX47	278 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	LMCD1	Q9NZU5	365 aa		19.51	■□□□□ 0.71
PNCK-231	ENST00000488994	MUC3A	Q02505	3323 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	LINC01553	A4QN01	128 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	OR6C75	A6NL08	312 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994		F8W810	466 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	CCDC130	P13994	396 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	IGFBP4	P22692	258 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	PSMC1	P62191	440 aa	Known RBP	19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	MDH1B	Q5I0G3	518 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	KCNT2	Q6UVM3	1135 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	C4orf50	Q6ZRC1	276 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	TTC30A	Q86WT1	665 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	ZDHHC17	Q8IUH5	632 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	FUK	Q8N0W3	1084 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	HSFY1	Q96LI6	401 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	RTP3	Q9BQQ7	232 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	MED10	Q9BTT4	135 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	UBXN6	Q9BZV1	441 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	CRTAC1	Q9NQ79	661 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	CAPN6	Q9Y6Q1	641 aa		19.5	■□□□□ 0.71
PNCK-231	ENST00000488994	HCRT	O43612	131 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	ATP2C2	O75185	946 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	PALM	O75781	387 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	FAM200B	P0CF97	657 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	ADORA2B	P29275	332 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	PPM1A	P35813	382 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	SMARCB1	Q12824	385 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	MRPL58	Q14197	206 aa	Known RBP	19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	NFE2	Q16621	373 aa	Predicted RBP	19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	VARS2	Q5ST30	1063 aa	Known RBP	19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	ZNF280D	Q6N043	979 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	C11orf63	Q6NUN7	778 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	ANKS3	Q6ZW76	656 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	SPRED2	Q7Z698	418 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	TMEM110	Q86TL2	294 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	C3orf20	Q8ND61	904 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	ZNF564	Q8TBZ8	553 aa	Predicted RBP	19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	ARNTL2	Q8WYA1	636 aa		19.49	■□□□□ 0.71
PNCK-231	ENST00000488994	IGSF21	Q96ID5	467 aa		19.49	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms