RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SMG5Q9UPR3 1016 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CCL27Q9Y4X3 112 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 ANGPTL3Q9Y5C1 460 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 PCDHA3Q9Y5H8 950 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 PSAT1Q9Y617 370 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 UBR5O95071 2799 aaPredicted RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 ABCC1P33527 1531 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CNTNAP4Q9C0A0 1308 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 TNRQ92752 1358 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 USP32Q8NFA0 1604 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TNS1Q9HBL0 1735 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 LOC100289279A0A1B0GTE1 492 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 UBA6A0AVT1 1052 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TRIM43BA6NCK2 446 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 WTIPA6NIX2 430 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 BTBD11A6QL63 1104 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 AGAP14A8MT82 685 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 A8MXE2 369 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 H3BNC9 293 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 LINC01387J3KSC0 135 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 KRIT1O00522 736 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MAN2B1O00754 1011 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 C2CD2LO14523 706 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 FCHO1O14526 889 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TSPAN4O14817 238 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CASQ2O14958 399 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MUSKO15146 869 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SYNCRIPO60506 623 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 EXOC3O60645 756 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 RNGTTO60942 597 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PALMO75781 387 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 KIAA0754O94854 1291 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PRPF6O94906 941 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PGM3O95394 542 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PRAMEF1O95521 474 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MLYCDO95822 493 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 DLGAP3O95886 979 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PNPP00491 289 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CTSBP07858 339 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SNRNP70P08621 437 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CNPP09543 421 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CCDC175P0C221 793 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TMEM253P0C7T8 217 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SFTPCP11686 197 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 BMP1P13497 986 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 NPR1P16066 1061 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 NPPBP16860 134 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 ENDOUP21128 410 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SAT1P21673 171 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 IL10P22301 178 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 FGFR3P22607 806 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MAPK4P31152 587 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 BMP8BP34820 402 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 RBMXP38159 391 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 THPOP40225 353 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TRPC1P48995 793 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 GPR15P49685 360 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MLLT6P55198 1093 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 POLR2FP61218 127 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 RPS16P62249 146 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MGAT2Q10469 447 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 EIF2B5Q13144 721 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 ADAM9Q13443 819 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CAMK1Q14012 370 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 UBAP2LQ14157 1087 aaKnown RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SCARF1Q14162 830 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TTLL4Q14679 1199 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MAPKAPK3Q16644 382 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SMU1Q2TAY7 513 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CCDC178Q5BJE1 867 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TTC38Q5R3I4 469 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PRAMEF14Q5SWL7 426 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF468Q5VIY5 522 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 GARNL3Q5VVW2 1013 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 KRT80Q6KB66 452 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 MFSD5Q6N075 450 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 DCLRE1AQ6PJP8 1040 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SLC30A9Q6PML9 568 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 RAB11FIP2Q7L804 512 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CHST3Q7LGC8 479 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 PXKQ7Z7A4 578 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TMEM110Q86TL2 294 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CDH24Q86UP0 819 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SCN4BQ8IWT1 228 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CYP4X1Q8N118 509 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 C17orf53Q8N3J3 647 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SH2D3CQ8N5H7 860 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 LZTR1Q8N653 840 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF655Q8N720 491 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 AGBL5Q8NDL9 886 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF540Q8NDQ6 660 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 GABPB2Q8TAK5 448 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 ZCCHC10Q8TBK6 192 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 GRK7Q8WTQ7 553 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SCFD2Q8WU76 684 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 GIMAP1Q8WWP7 306 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 KAT5Q92993 513 aa3.11□□□□□ -1.91
HMGN4-202ENST00000477243 SYAP1Q96A49 352 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 TRIM43Q96BQ3 446 aaPredicted RBP3.11□□□□□ -1.91
HMGN4-202ENST00000477243 CHFRQ96EP1 664 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms