RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	GDAP2	Q9NXN4	497 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	ZMYM5	Q9UJ78	669 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	L1RE1	Q9UN81	338 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	PCDHGA2	Q9Y5H1	932 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	PIAS3	Q9Y6X2	628 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	SOBP	A7XYQ1	873 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	ZNF263	O14978	683 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	LILRB5	O75023	590 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	CST3	P01034	146 aa	Predicted RBP	13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	TDGF1	P13385	188 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	GABRR2	P28476	465 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	CDC25C	P30307	473 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	VEPH1	Q14D04	833 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	MGAT5B	Q3V5L5	792 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	ZNF667	Q5HYK9	610 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	C1orf228	Q6PIY5	440 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	DCP1B	Q8IZD4	617 aa	Known RBP	13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	TMEM86A	Q8N2M4	240 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	SUMF1	Q8NBK3	374 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	OR6B3	Q8NGW1	331 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	SLITRK6	Q9H5Y7	841 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	ABCB6	Q9NP58	842 aa		13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	ABI2	Q9NYB9	513 aa	Predicted RBP	13.58	□□□□□ -0.24
FDPS-204	ENST00000461507	ANAPC1	Q9H1A4	1944 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	PPP1R3G	B7ZBB8	358 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	MAPK13	O15264	365 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	SLC16A3	O15427	465 aa	Known RBP	13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	STX10	O60499	249 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	PRAMEF12	O95522	483 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	MBD3	O95983	291 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	P4HA1	P13674	534 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	HMGA1	P17096	107 aa	Known RBP	13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	BMP6	P22004	513 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	MXI1	P50539	228 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	PSMC1	P62191	440 aa	Known RBP	13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	NFE2	Q16621	373 aa	Predicted RBP	13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	ARHGAP29	Q52LW3	1261 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	ARHGAP15	Q53QZ3	475 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	INTS6L	Q5JSJ4	861 aa	Known RBP	13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	GPR158	Q5T848	1215 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	TMEM150A	Q86TG1	271 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	TOP6BL	Q8N6T0	577 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	GPT2	Q8TD30	523 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	LRRC3B	Q96PB8	259 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	ACBD6	Q9BR61	282 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	GZF1	Q9H116	711 aa	Predicted RBP	13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	ATXN3L	Q9H3M9	355 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	TASP1	Q9H6P5	420 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	TMLHE	Q9NVH6	421 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	PCDHB5	Q9Y5E4	795 aa		13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	ZNF638	Q14966	1978 aa	Known RBP	13.57	□□□□□ -0.24
FDPS-204	ENST00000461507	HELZ	P42694	1942 aa	Known RBP	13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	MYBPHL	A2RUH7	354 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	GABRD	O14764	452 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	HCRT	O43612	131 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	HLA-DRA	P01903	254 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	C4BPA	P04003	597 aa	Known RBP	13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	PDGFRB	P09619	1106 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	PCSK1	P29120	753 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	ATIC	P31939	592 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	RAP1GAP	P47736	663 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	LHX1	P48742	406 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	PLCB2	Q00722	1185 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	MTAP	Q13126	283 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	TAF12	Q16514	161 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	SOWAHA	Q2M3V2	549 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	CFAP221	Q4G0U5	840 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	SV2A	Q7L0J3	742 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	OSTM1	Q86WC4	334 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	YAF2	Q8IY57	180 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	FAM3C	Q92520	227 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	SYT15	Q9BQS2	421 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	PI4K2A	Q9BTU6	479 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	SMYD3	Q9H7B4	428 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	ZSCAN32	Q9NX65	697 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507	DACH1	Q9UI36	760 aa		13.56	□□□□□ -0.24
FDPS-204	ENST00000461507		A8MXQ7	604 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	IKBKB	O14920	756 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	NOL4	O94818	638 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	PAPSS2	O95340	614 aa	Predicted RBP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	VNN1	O95497	513 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	FGFR1OP	O95684	399 aa	Known RBP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	F11	P03951	625 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	CHRNB1	P11230	501 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	DDX6	P26196	483 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	CTH	P32929	405 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	NLRP12	P59046	1061 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	CYP4F8	P98187	520 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	CYP27A1	Q02318	531 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	CSTF1	Q05048	431 aa	Known RBP	13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	PPP3CA	Q08209	521 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	SGSM1	Q2NKQ1	1148 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	ZACN	Q401N2	412 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	KRT39	Q6A163	491 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	SPOPL	Q6IQ16	392 aa		13.55	□□□□□ -0.24
FDPS-204	ENST00000461507	TTI2	Q6NXR4	508 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms