RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 FLT3P36888 993 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 SLC1A1P43005 524 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 RAB27AP51159 221 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 FKBP1BP68106 108 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 DEUP1Q05D60 604 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 PDIA2Q13087 525 aaKnown RBP11.08□□□□□ -0.64
TOP3B-210ENST00000444502 BYSLQ13895 437 aaKnown RBP11.08□□□□□ -0.64
TOP3B-210ENST00000444502 CLEC16AQ2KHT3 1053 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 TMBIM4Q9HC24 238 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 COL16A1Q07092 1604 aaPredicted RBP11.08□□□□□ -0.64
TOP3B-210ENST00000444502 PLCH1Q4KWH8 1693 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 LTBP4Q8N2S1 1624 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 PRRG1O14668 218 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 SUN1O94901 812 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 HSPA9P38646 679 aaKnown RBP11.08□□□□□ -0.64
TOP3B-210ENST00000444502 FNTAP49354 379 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 TAF6P49848 677 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 FMO1Q01740 532 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 TMED1Q13445 227 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 FAM110CQ1W6H9 321 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 PPP1R2P3Q6NXS1 205 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 SPATA21Q7Z572 469 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 MCOLN2Q8IZK6 566 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 LRRC8CQ8TDW0 803 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 BRI3BPQ8WY22 251 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 RBM15Q96T37 977 aaKnown RBP eCLIP11.08□□□□□ -0.642e-6■■□□□ 14.2
TOP3B-210ENST00000444502 PRMT1Q99873 361 aaKnown RBP11.08□□□□□ -0.64
TOP3B-210ENST00000444502 PABPC3Q9H361 631 aaKnown RBP11.08□□□□□ -0.64
TOP3B-210ENST00000444502 TRPC7Q9HCX4 862 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 PAPPAQ13219 1627 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 GPR182O15218 404 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 RAG1P15918 1043 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 GLRA2P23416 452 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 RPL21P46778 160 aaKnown RBP11.08□□□□□ -0.64
TOP3B-210ENST00000444502 CCL23P55773 120 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 IL9RQ01113 521 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 KYAT1Q16773 422 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 DCAF6Q58WW2 860 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 CENPUQ71F23 418 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 KDELC2Q7Z4H8 507 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 SKA2Q8WVK7 121 aaPredicted RBP11.08□□□□□ -0.64
TOP3B-210ENST00000444502 KLHL8Q9P2G9 620 aaPredicted RBP11.08□□□□□ -0.64
TOP3B-210ENST00000444502 UBQLN1Q9UMX0 589 aaKnown RBP11.08□□□□□ -0.64
TOP3B-210ENST00000444502 PCDHB7Q9Y5E2 793 aa11.08□□□□□ -0.64
TOP3B-210ENST00000444502 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 B4GALT5O43286 388 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 PLA2G6O60733 806 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 PYGBP11216 843 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 XPAP23025 273 aaPredicted RBP11.07□□□□□ -0.64
TOP3B-210ENST00000444502 ALDH7A1P49419 539 aaKnown RBP11.07□□□□□ -0.64
TOP3B-210ENST00000444502 ANKRD20A8PQ5CZ79 823 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 FYB2Q5VWT5 728 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 TMEM154Q6P9G4 183 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 CPNE8Q86YQ8 564 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 FAM71AQ8IYT1 594 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 PDIK1LQ8N165 341 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 EMC1Q8N766 993 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 PRCCQ92733 491 aaPredicted RBP11.07□□□□□ -0.64
TOP3B-210ENST00000444502 DPF3Q92784 378 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 CHMP6Q96FZ7 201 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 FGD4Q96M96 766 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 DDX23Q9BUQ8 820 aaKnown RBP11.07□□□□□ -0.64
TOP3B-210ENST00000444502 ERVK-5Q9HDB9 667 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 RBPJLQ9UBG7 517 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 SLC15A5A6NIM6 579 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 INHBAP08476 426 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 MSH2P43246 934 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 OR5B17Q8NGF7 314 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 CD99L2Q8TCZ2 262 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 ZNF606Q8WXB4 792 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 SHC3Q92529 594 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 TMEM169Q96HH4 297 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 HES6Q96HZ4 224 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 GAD1Q99259 594 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 RNPEPQ9H4A4 650 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 TXNRD2Q9NNW7 524 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 CHST7Q9NS84 486 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 COG5Q9UP83 839 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 MYH1P12882 1939 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 LRP5O75197 1615 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 ZNF844Q08AG5 666 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 GOLGA7BQ2TAP0 167 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 C11orf91Q3C1V1 193 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 TMC3Q7Z5M5 1100 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 TRIM42Q8IWZ5 723 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 DCLK2Q8N568 766 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 CFAP36Q96G28 342 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 DEFB118Q96PH6 123 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 CISHQ9NSE2 258 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 SLC38A7Q9NVC3 462 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 DMAC2Q9NW81 257 aa11.07□□□□□ -0.64
TOP3B-210ENST00000444502 MRPL42Q9Y6G3 142 aaKnown RBP11.07□□□□□ -0.64
TOP3B-210ENST00000444502 ZNF189O75820 626 aaPredicted RBP11.06□□□□□ -0.64
TOP3B-210ENST00000444502 THP07101 528 aa11.06□□□□□ -0.64
TOP3B-210ENST00000444502 HNRNPCP07910 306 aaKnown RBP eCLIP11.06□□□□□ -0.642e-10■□□□□ 9.8
TOP3B-210ENST00000444502 EPHB1P54762 984 aa11.06□□□□□ -0.64
TOP3B-210ENST00000444502 JAM2P57087 298 aa11.06□□□□□ -0.64
TOP3B-210ENST00000444502 PDE1BQ01064 536 aa11.06□□□□□ -0.64
TOP3B-210ENST00000444502 DRP2Q13474 957 aa11.06□□□□□ -0.64
TOP3B-210ENST00000444502 VEPH1Q14D04 833 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms