RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 UPP1Q16831 310 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 ARHGAP29Q52LW3 1261 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 NYAP1Q6ZVC0 841 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 KIAA1328Q86T90 577 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 GLYCTKQ8IVS8 523 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 ABI1Q8IZP0 508 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 C17orf53Q8N3J3 647 aaPredicted RBP12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 C12orf76Q8N812 135 aaPredicted RBP12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 SLC20A1Q8WUM9 679 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 MMS19Q96T76 1030 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 HINFPQ9BQA5 517 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 SMYD3Q9H7B4 428 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 GOLGA2P5Q9HBQ8 144 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 TRMT1Q9NXH9 659 aaKnown RBP12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 KIAA1257Q9ULG3 409 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 R4GN57 208 aa12.46□□□□□ -0.41
AC009404.1-202ENST00000439955 BTNL10A8MVZ5 291 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 TMEM189-UBE2V1I3L0A0 370 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 MED7O43513 233 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 HUS1O60921 280 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 LSM8O95777 96 aaKnown RBP12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 LMNAP02545 664 aaKnown RBP12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 FGFR1P11362 822 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 NPR3P17342 541 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 HOXB8P17481 243 aaPredicted RBP12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 CHRNB2P17787 502 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 CD58P19256 250 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 AOC1P19801 751 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 WARSP23381 471 aaKnown RBP12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 CA8P35219 290 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 ARHGAP25P42331 645 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 CLCNKBP51801 687 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 RAD23BP54727 409 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 CYP27A1Q02318 531 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 KIF5AQ12840 1032 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 STILQ15468 1287 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 CCDC122Q5T0U0 273 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 RARS2Q5T160 578 aaKnown RBP12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 PDE12Q6L8Q7 609 aaKnown RBP12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 CES5AQ6NT32 575 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 DCLRE1AQ6PJP8 1040 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 GPIHBP1Q8IV16 184 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 CCDC105Q8IYK2 499 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 TMEM86AQ8N2M4 240 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 TMEM130Q8N3G9 435 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 TDRD5Q8NAT2 981 aaKnown RBP12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 DTWD2Q8NBA8 298 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 APPL2Q8NEU8 664 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 FEZF2Q8TBJ5 459 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 WHAMMQ8TF30 809 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 NT5C1AQ9BXI3 368 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 ADAM7Q9H2U9 754 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 TBC1D13Q9NVG8 400 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 MYO1AQ9UBC5 1043 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 PCDHGC3Q9UN70 934 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 INPP5FQ9Y2H2 1132 aa12.45□□□□□ -0.42
AC009404.1-202ENST00000439955 CASTOR2A6NHX0 329 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 SPTLC1O15269 473 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 RTN2O75298 545 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 MMEP08473 750 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 H2AFZP0C0S5 128 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 RAP1GAPP47736 663 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 NDST1P52848 882 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 CDH8P55286 799 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 SOWAHAQ2M3V2 549 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 H2AFVQ71UI9 128 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 TMC7Q7Z402 723 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 COLGALT2Q8IYK4 626 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 DCLK2Q8N568 766 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 SLC4A11Q8NBS3 891 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 RIN2Q8WYP3 895 aaPredicted RBP12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 CASP10Q92851 521 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 TMEM176AQ96HP8 235 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 CASD1Q96PB1 797 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 FAM193BQ96PV7 902 aaPredicted RBP12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 ISCUQ9H1K1 167 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 CWH43Q9H720 699 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 PUF60Q9UHX1 559 aaKnown RBP12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 L1RE1Q9UN81 338 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 HCFC2Q9Y5Z7 792 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 ZNF292O60281 2723 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 TSC2P49815 1807 aa12.44□□□□□ -0.42
AC009404.1-202ENST00000439955 NCOR2Q9Y618 2525 aa12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 FNDC1Q4ZHG4 1894 aaPredicted RBP12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 A0A0A6YYK5 440 aaPredicted RBP12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 CARNS1A5YM72 827 aa12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 STK25O00506 426 aa12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 CYB561D2O14569 222 aa12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 GABRDO14764 452 aa12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 THAP12O43422 761 aa12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 CYP1A1P04798 512 aaPredicted RBP12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 TMEM253P0C7T8 217 aa12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 VDRP11473 427 aa12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 UNGP13051 313 aaPredicted RBP12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 CDH5P33151 784 aaPredicted RBP12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 RNASELQ05823 741 aaKnown RBP12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 PUM1Q14671 1186 aaKnown RBP eCLIP12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 PTPN14Q15678 1187 aa12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 CLEC16AQ2KHT3 1053 aa12.43□□□□□ -0.42
AC009404.1-202ENST00000439955 TAF3Q5VWG9 929 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms