RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 LPPQ93052 612 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 TOP1MTQ969P6 601 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 TP53INP1Q96A56 240 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 KLHDC7BQ96G42 594 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 VMP1Q96GC9 406 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 DMRTB1Q96MA1 342 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 FAM213AQ9BRX8 229 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 RBCK1Q9BYM8 510 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 NAT10Q9H0A0 1025 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 TMEM117Q9H0C3 514 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 SEMA6BQ9H3T3 888 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 NXF3Q9H4D5 531 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 RSAD1Q9HA92 442 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 PTPRHQ9HD43 1115 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 AGPAT3Q9NRZ7 376 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 SNTG2Q9NY99 539 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 HSPBP1Q9NZL4 362 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 IP6K2Q9UHH9 426 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 MSRAQ9UJ68 235 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 TRAF3IP3Q9Y228 551 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 INPP5FQ9Y2H2 1132 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 GIT1Q9Y2X7 761 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 R3HCC1Q9Y3T6 440 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 HES2Q9Y543 173 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 INSL6Q9Y581 213 aa6.64□□□□□ -1.35
ECHDC1-208ENST00000436638 A0A1W2PP55 124 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 A0A1W2PPC1 479 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 SYCE3A1L190 88 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 GOLGA8IPA6NC78 632 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 GOLGA8JA6NMD2 632 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 TMEM110-MUSTN1A8MSY1 372 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 METTL12A8MUP2 240 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 TISP43B9A030 160 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 H0YHG0 523 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 EIF1AYO14602 144 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 DDX3YO15523 660 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 TGFB1I1O43294 461 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 RECQL4O94761 1208 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 NR3C1P04150 777 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 EDN1P05305 212 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 MSL3P1P0C860 447 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 EPB41P11171 864 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 FGFR1P11362 822 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 KRT13P13646 458 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 SIP14410 1827 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 PROZP22891 400 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 NR2F2P24468 414 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 AKAP5P24588 427 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 STIP1P31948 543 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 MLH1P40692 756 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 ARL4DP49703 201 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 ACOT2P49753 483 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 STX17P56962 302 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 FKBP3Q00688 224 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 BTG3Q14201 252 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 RAB30Q15771 203 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 EDRF1Q3B7T1 1238 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 CCDC40Q4G0X9 1142 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 FILIP1LQ4L180 1135 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 PAN2Q504Q3 1202 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 SEZ6Q53EL9 994 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 DNAJC21Q5F1R6 531 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 NOMO2Q5JPE7 1267 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 SYCP2LQ5T4T6 812 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 PPP4R4Q6NUP7 873 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 SLC39A4Q6P5W5 647 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 PDXDC1Q6P996 788 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 RBM43Q6ZSC3 357 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 C12orf56Q8IXR9 622 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 SAMD14Q8IZD0 417 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 AGGF1Q8N302 714 aaeCLIP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 ARL6IP6Q8N6S5 226 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 SMG8Q8ND04 991 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 TAF4BQ92750 862 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 RELTQ969Z4 430 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 VWCEQ96DN2 955 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 SAAL1Q96ER3 474 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 FNBP1Q96RU3 617 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 GAD1Q99259 594 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 RAD9AQ99638 391 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 CBWD1Q9BRT8 395 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 MRPL9Q9BYD2 267 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 IQCGQ9H095 443 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 IKZF4Q9H2S9 585 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 KCTD10Q9H3F6 313 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 LIN7BQ9HAP6 207 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 PLEKHA5Q9HAU0 1116 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 COMMD8Q9NX08 183 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 KCNK4Q9NYG8 393 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 RBAKQ9NYW8 714 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 CLIC5Q9NZA1 410 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 ZMYM2Q9UBW7 1377 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 RWDD2AQ9UIY3 292 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 SOX13Q9UN79 622 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 STYXL1Q9Y6J8 313 aa6.63□□□□□ -1.35
ECHDC1-208ENST00000436638 A0A1W2PRQ8 180 aa6.62□□□□□ -1.35
ECHDC1-208ENST00000436638 CCDC66A2RUB6 948 aa6.62□□□□□ -1.35
ECHDC1-208ENST00000436638 TRIM49BA6NDI0 452 aa6.62□□□□□ -1.35
ECHDC1-208ENST00000436638 SMTNL1A8MU46 457 aa6.62□□□□□ -1.35
ECHDC1-208ENST00000436638 F8W735 103 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms