RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 EXD1Q8NHP7 514 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 HDAC11Q96DB2 347 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 NTPCRQ9BSD7 190 aaKnown RBP11.13□□□□□ -0.63
NOD1-206ENST00000434755 OSBPL8Q9BZF1 889 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 SGPL1O95470 568 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 GNL1P36915 607 aaPredicted RBP11.13□□□□□ -0.63
NOD1-206ENST00000434755 DCAF6Q58WW2 860 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 TMEM169Q96HH4 297 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
NOD1-206ENST00000434755 IPO11Q9UI26 975 aaKnown RBP11.13□□□□□ -0.63
NOD1-206ENST00000434755 GPC4O75487 556 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 ALDH7A1P49419 539 aaKnown RBP11.13□□□□□ -0.63
NOD1-206ENST00000434755 HEATR6Q6AI08 1181 aaKnown RBP11.13□□□□□ -0.63
NOD1-206ENST00000434755 IRF2BP2Q7Z5L9 587 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 CREG2Q8IUH2 290 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 TMEM86AQ8N2M4 240 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 ASAP3Q8TDY4 903 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 EXT2Q93063 718 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 WHRNQ9P202 907 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 TIMM13Q9Y5L4 95 aaPredicted RBP11.13□□□□□ -0.63
NOD1-206ENST00000434755 CNTRLQ7Z7A1 2325 aa11.13□□□□□ -0.63
NOD1-206ENST00000434755 CXCL8P10145 99 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 ACO1P21399 889 aaKnown RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 COILP38432 576 aaPredicted RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 CAPSQ13938 189 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 BOLA3Q53S33 107 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 C1orf131Q8NDD1 294 aaKnown RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 PNKPQ96T60 521 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 SUDS3Q9H7L9 328 aaPredicted RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 STK39Q9UEW8 545 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 CNTNAP2Q9UHC6 1331 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 FBXO47Q5MNV8 452 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 CXCL17Q6UXB2 119 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 MAMDC4Q6UXC1 1216 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 DEFB128Q7Z7B8 93 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 ATP11CQ8NB49 1132 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 BTBD6Q96KE9 485 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 PPP1R2P1Q96PQ5 205 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 ABI2Q9NYB9 513 aaPredicted RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 BAIAP2L1Q9UHR4 511 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 KNL1Q8NG31 2342 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 LRRIQ3A6PVS8 624 aaPredicted RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 GPR25O00155 361 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 DPYSL4O14531 572 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 CLGNO14967 610 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 APOEP02649 317 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 GHRP10912 638 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 RAG1P15918 1043 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 AKAP5P24588 427 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 ARL2P36404 184 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 RECQLP46063 649 aaPredicted RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 MYL6P60660 151 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 SLC12A1Q13621 1099 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 HSDL1Q3SXM5 330 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 NT5DC3Q86UY8 548 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 PPM1NQ8N819 430 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 APBB2Q92870 758 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 GRAMD1AQ96CP6 724 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 ACO2Q99798 780 aaKnown RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 PPP1R12CQ9BZL4 782 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 TRPC7Q9HCX4 862 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 TTI1O43156 1089 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 FBXO21O94952 628 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 PGK1P00558 417 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 AMHP03971 560 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 GRM5P41594 1212 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 AARSP49588 968 aaKnown RBP eCLIP11.12□□□□□ -0.63
NOD1-206ENST00000434755 SRRM1Q8IYB3 904 aaKnown RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 OR6P1Q8NGX9 317 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 SH3TC2Q8TF17 1288 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 RAB3IPQ96QF0 476 aaPredicted RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 TSEN34Q9BSV6 310 aaKnown RBP11.12□□□□□ -0.63
NOD1-206ENST00000434755 FSD1LQ9BXM9 530 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 ARHGAP28Q9P2N2 729 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 SLC8A2Q9UPR5 921 aa11.12□□□□□ -0.63
NOD1-206ENST00000434755 A0A1B0GUA9 196 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 ARHGAP42A6NI28 874 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 H3BRJ5 948 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 PRRG1O14668 218 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 KRT37O76014 449 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 FAM200BP0CF97 657 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 SESN2P58004 480 aaPredicted RBP11.11□□□□□ -0.63
NOD1-206ENST00000434755 MCOLN2Q8IZK6 566 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 USP33Q8TEY7 942 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 HTATIP2Q9BUP3 242 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 TMEM39AQ9NV64 488 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 FAM8A1Q9UBU6 413 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 GIT1Q9Y2X7 761 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 PCDHA3Q9Y5H8 950 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 NR2E3Q9Y5X4 410 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 KIAA0100Q14667 2235 aaKnown RBP11.11□□□□□ -0.63
NOD1-206ENST00000434755 NEMP1O14524 444 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 ATP9BO43861 1147 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 EDNRBP24530 442 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 RPL9P32969 192 aaKnown RBP11.11□□□□□ -0.63
NOD1-206ENST00000434755 RPL10AP62906 217 aaKnown RBP11.11□□□□□ -0.63
NOD1-206ENST00000434755 ROR1Q01973 937 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 ASPHQ12797 758 aa11.11□□□□□ -0.63
NOD1-206ENST00000434755 CBWD6Q4V339 395 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms