RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 MAB21L3Q8N8X9 362 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 B3GALNT2Q8NCR0 500 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 BPIFB1Q8TDL5 484 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 TNIP3Q96KP6 325 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 SPATA17Q96L03 361 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 ELOVL4Q9GZR5 314 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 DPEP3Q9H4B8 488 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 FAM86C1Q9NVL1 165 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 THG1LQ9NWX6 298 aaKnown RBP16.33■□□□□ 0.2
NUP50-204ENST00000417702 EHD2Q9NZN4 543 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 CHMP5Q9NZZ3 219 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 NME7Q9Y5B8 376 aa16.33■□□□□ 0.2
NUP50-204ENST00000417702 NCANO14594 1321 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 ATP8B3O60423 1300 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 PRAMEF12O95522 483 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 ASS1P00966 412 aaKnown RBP16.32■□□□□ 0.2
NUP50-204ENST00000417702 HLA-DRAP01903 254 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 EPB41P11171 864 aaKnown RBP16.32■□□□□ 0.2
NUP50-204ENST00000417702 GLULP15104 373 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
NUP50-204ENST00000417702 MAGEA9P43362 315 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 RAP1GAPP47736 663 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 GCLMP48507 274 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 MRE11P49959 708 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 CDH8P55286 799 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 PLCB2Q00722 1185 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 COBLL1Q53SF7 1204 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 C1orf220Q5T0J3 134 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 TXNDC8Q6A555 127 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 DENND5BQ6ZUT9 1274 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
NUP50-204ENST00000417702 CCDC150Q8NCX0 1101 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
NUP50-204ENST00000417702 C8orf48Q96LL4 319 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 SMG9Q9H0W8 520 aaKnown RBP16.32■□□□□ 0.2
NUP50-204ENST00000417702 MMRN2Q9H8L6 949 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 DLGAP2Q9P1A6 1054 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 MTF2Q9Y483 593 aaPredicted RBP16.32■□□□□ 0.2
NUP50-204ENST00000417702 PIAS3Q9Y6X2 628 aa16.32■□□□□ 0.2
NUP50-204ENST00000417702 F8VP50 259 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 STX10O60499 249 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 LRRN2O75325 713 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 TARSP26639 723 aaKnown RBP16.31■□□□□ 0.2
NUP50-204ENST00000417702 GTF2H1P32780 548 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 KPNA1P52294 538 aaPredicted RBP16.31■□□□□ 0.2
NUP50-204ENST00000417702 STIM1Q13586 685 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 C1orf228Q6PIY5 440 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 FAM3CQ92520 227 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 ELMO3Q96BJ8 720 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 LRRC3BQ96PB8 259 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 PHOX2BQ99453 314 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 ZNF518BQ9C0D4 1074 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 C8orf33Q9H7E9 229 aaPredicted RBP16.31■□□□□ 0.2
NUP50-204ENST00000417702 KIF9Q9HAQ2 790 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 TRPC7Q9HCX4 862 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 TDP1Q9NUW8 608 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 WDFY4Q6ZS81 3184 aa16.31■□□□□ 0.2
NUP50-204ENST00000417702 CACNA1IQ9P0X4 2223 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 TRAV19A0A0A6YYK7 116 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 ARNTLO00327 626 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 TADA3O75528 432 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 MLLT6P55198 1093 aaPredicted RBP16.3■□□□□ 0.2
NUP50-204ENST00000417702 FKBP3Q00688 224 aaKnown RBP16.3■□□□□ 0.2
NUP50-204ENST00000417702 PPP3CAQ08209 521 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 KRT39Q6A163 491 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 SPOPLQ6IQ16 392 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 CC2D1AQ6P1N0 951 aaPredicted RBP16.3■□□□□ 0.2
NUP50-204ENST00000417702 UNC93AQ86WB7 457 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 C1orf210Q8IVY1 113 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 USP13Q92995 863 aaPredicted RBP16.3■□□□□ 0.2
NUP50-204ENST00000417702 EEF2KMTQ96G04 330 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 ZFYVE19Q96K21 471 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 MED10Q9BTT4 135 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 B3GNT5Q9BYG0 378 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 SDCBP2Q9H190 292 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 TMEM8AQ9HCN3 771 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 SPATA6Q9NWH7 488 aaPredicted RBP16.3■□□□□ 0.2
NUP50-204ENST00000417702 TRPM5Q9NZQ8 1165 aa16.3■□□□□ 0.2
NUP50-204ENST00000417702 NDRG2Q9UN36 371 aaKnown RBP16.3■□□□□ 0.2
NUP50-204ENST00000417702 PTPRZ1P23471 2315 aaPredicted RBP16.29■□□□□ 0.2
NUP50-204ENST00000417702 CLDN5O00501 218 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 PSMA7O14818 248 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 CKMP06732 381 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 USP17L7P0C7H9 530 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 PPP1R2P41236 205 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 PDE6CP51160 858 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 NDST1P52848 882 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 NOP14P78316 857 aaKnown RBP16.29■□□□□ 0.2
NUP50-204ENST00000417702 LRRC63Q05C16 580 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
NUP50-204ENST00000417702 ACOT1Q86TX2 421 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 TAS1R2Q8TE23 839 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 CLDN23Q96B33 292 aa16.29■□□□□ 0.2
NUP50-204ENST00000417702 IPO9Q96P70 1041 aaKnown RBP16.29■□□□□ 0.2
NUP50-204ENST00000417702 DNAI2Q9GZS0 605 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms