RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 IFNAR1P17181 557 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 PDIA6Q15084 440 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 CTXN3Q4LDR2 81 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 KIF2BQ8N4N8 673 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 OR2W6PQ8NHA6 318 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 DIS3Q9Y2L1 958 aaKnown RBP19.16■□□□□ 0.66
SHANK3-202ENST00000414786 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.16■□□□□ 0.66
SHANK3-202ENST00000414786 ZNF500O60304 480 aaPredicted RBP19.16■□□□□ 0.66
SHANK3-202ENST00000414786 MYBL1P10243 752 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 ZNF200P98182 395 aaPredicted RBP19.16■□□□□ 0.66
SHANK3-202ENST00000414786 NT5C1AQ9BXI3 368 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 LNPEPQ9UIQ6 1025 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 CDC25BP30305 580 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 ZSWIM2Q8NEG5 633 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 HPDLQ96IR7 371 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 SH3GL1Q99961 368 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 MIF4GDA9UHW6 222 aaKnown RBP19.16■□□□□ 0.66
SHANK3-202ENST00000414786 ODC1P11926 461 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 GMPSP49915 693 aaPredicted RBP19.16■□□□□ 0.66
SHANK3-202ENST00000414786 ZNF786Q8N393 782 aa19.16■□□□□ 0.66
SHANK3-202ENST00000414786 NARS2Q96I59 477 aaKnown RBP19.16■□□□□ 0.66
SHANK3-202ENST00000414786 ERN1O75460 977 aaKnown RBP19.15■□□□□ 0.66
SHANK3-202ENST00000414786 CLTBP09497 229 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 BRSK2Q8IWQ3 736 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 PIH1D1Q9NWS0 290 aaKnown RBP19.15■□□□□ 0.66
SHANK3-202ENST00000414786 A0A1B0GW55 424 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 SLC12A8A0AV02 714 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 ACSL4O60488 711 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 VPS26AO75436 327 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 USP1O94782 785 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 DUX4L2P0CJ85 424 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 DUX4L3P0CJ86 424 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 DUX4L4P0CJ87 422 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 DUX4L5P0CJ88 424 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 DUX4L6P0CJ89 424 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 DUX4L7P0CJ90 424 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 ATP6V0D2Q8N8Y2 350 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 DUX4Q9UBX2 424 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 KLHL20Q9Y2M5 609 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 IFRD1O00458 451 aaPredicted RBP19.15■□□□□ 0.66
SHANK3-202ENST00000414786 IFNA16P05015 189 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 CAV1Q03135 178 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 PRKAA1Q13131 559 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 RESP18Q5W5W9 173 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 UTP15Q8TED0 518 aaKnown RBP19.15■□□□□ 0.66
SHANK3-202ENST00000414786 ARHGEF26Q96DR7 871 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 PANX2Q96RD6 677 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 RBM7Q9Y580 266 aaKnown RBP19.15■□□□□ 0.66
SHANK3-202ENST00000414786 AP3D1O14617 1153 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 CD4P01730 458 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 RAG1P15918 1043 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 BRINP3Q76B58 766 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 TFAP2DQ7Z6R9 452 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 RNPC3Q96LT9 517 aaKnown RBP19.15■□□□□ 0.66
SHANK3-202ENST00000414786 S100A13Q99584 98 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 GPATCH2LQ9NWQ4 482 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 GJB7Q6PEY0 223 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 PARGQ86W56 976 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 PIK3R5Q8WYR1 880 aa19.15■□□□□ 0.66
SHANK3-202ENST00000414786 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.15■□□□□ 0.661e-8■□□□□ 9
SHANK3-202ENST00000414786 ZNF286BP0CG31 522 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 NLRP14Q86W24 1093 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 STAMBPL1Q96FJ0 436 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 CEP41Q9BYV8 373 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 WWP1Q9H0M0 922 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 KLHL31Q9H511 634 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 HPS5Q9UPZ3 1129 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 NEU2Q9Y3R4 380 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 GPATCH8Q9UKJ3 1502 aaKnown RBP19.14■□□□□ 0.66
SHANK3-202ENST00000414786 ERI2A8K979 691 aaKnown RBP19.14■□□□□ 0.66
SHANK3-202ENST00000414786 CCDC188H7C350 402 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 CHUKO15111 745 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 RPS6KA4O75676 772 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 LTFP02788 710 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 EPS8Q12929 822 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 DENND6AQ8IWF6 608 aa19.14■□□□□ 0.66
SHANK3-202ENST00000414786 PTPN12Q05209 780 aaKnown RBP19.14■□□□□ 0.65
SHANK3-202ENST00000414786 TPGS1Q6ZTW0 290 aa19.14■□□□□ 0.65
SHANK3-202ENST00000414786 TMCC3Q9ULS5 477 aa19.14■□□□□ 0.65
SHANK3-202ENST00000414786 CCNT2O60583 730 aaKnown RBP19.14■□□□□ 0.65
SHANK3-202ENST00000414786 RTN2O75298 545 aa19.14■□□□□ 0.65
SHANK3-202ENST00000414786 BOP1Q14137 746 aaKnown RBP19.14■□□□□ 0.65
SHANK3-202ENST00000414786 PCYOX1LQ8NBM8 494 aa19.14■□□□□ 0.65
SHANK3-202ENST00000414786 EIF3LQ9Y262 564 aaKnown RBP19.14■□□□□ 0.65
SHANK3-202ENST00000414786 ST13P50502 369 aaKnown RBP19.14■□□□□ 0.65
SHANK3-202ENST00000414786 PTAR1Q7Z6K3 402 aaPredicted RBP19.14■□□□□ 0.65
SHANK3-202ENST00000414786 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
SHANK3-202ENST00000414786 EFNA5P52803 228 aa19.14■□□□□ 0.65
SHANK3-202ENST00000414786 KIAA1324Q6UXG2 1013 aaKnown RBP19.14■□□□□ 0.65
SHANK3-202ENST00000414786 SIKE1Q9BRV8 207 aa19.14■□□□□ 0.65
SHANK3-202ENST00000414786 AVENQ9NQS1 362 aaPredicted RBP19.14■□□□□ 0.65
SHANK3-202ENST00000414786 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.14■□□□□ 0.65
SHANK3-202ENST00000414786 PRKAG3Q9UGI9 489 aa19.14■□□□□ 0.65
SHANK3-202ENST00000414786 SHOC2Q9UQ13 582 aa19.14■□□□□ 0.65
SHANK3-202ENST00000414786 ZNF23P17027 643 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 TCF7P36402 384 aaPredicted RBP19.13■□□□□ 0.65
SHANK3-202ENST00000414786 ACOT1Q86TX2 421 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 FAM124AQ86V42 546 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 FAM20AQ96MK3 541 aa19.13■□□□□ 0.65
SHANK3-202ENST00000414786 STRBPQ96SI9 672 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms