RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 CPXM1Q96SM3 734 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 CYTH2Q99418 400 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 MAFGO15525 162 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 KDSRQ06136 332 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 MUM1Q2TAK8 710 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 TMEM63BQ5T3F8 832 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 ATF7IP2Q5U623 682 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 OTOAQ7RTW8 1153 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 RFWD2Q8NHY2 731 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 SEPT1Q8WYJ6 367 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 TEPSINQ96N21 525 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 R3HDMLQ9H3Y0 253 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 PPARGC1AQ9UBK2 798 aaKnown RBP13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 CHKBQ9Y259 395 aa13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 MRPL42Q9Y6G3 142 aaKnown RBP13.27□□□□□ -0.29
PPP4R1-202ENST00000400555 ZBED1O96006 694 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 TMPRSS15P98073 1019 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 ZNF252P-AS1Q0IIN9 211 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 FAAP100Q0VG06 881 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 GLRA4Q5JXX5 417 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 CGB2Q6NT52 195 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 EFCAB12Q6NXP0 572 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 PHF13Q86YI8 300 aaPredicted RBP13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 SPDL1Q96EA4 605 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 MECRQ9BV79 373 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 MCM8Q9UJA3 840 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 OGTO15294 1046 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 GYG2O15488 501 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 KLRC2P26717 231 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 GCKP35557 465 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 ARFIP2P53365 341 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 KBTBD12Q3ZCT8 623 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 TREML2Q5T2D2 321 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 MROH9Q5TGP6 573 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 FAM49AQ9H0Q0 323 aaPredicted RBP13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 GRID1Q9ULK0 1009 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 G3BP2Q9UN86 482 aaKnown RBP13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 CCDC78A2IDD5 438 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 SPATA31C2B4DYI2 1134 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 KBTBD13C9JR72 458 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 ATP8B3O60423 1300 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 ASS1P00966 412 aaKnown RBP13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 VTNP04004 478 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 NFICP08651 508 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 ESRRAP11474 423 aaPredicted RBP13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 SAT1P21673 171 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 CCDC62Q6P9F0 684 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 CCDC110Q8TBZ0 833 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 AGR3Q8TD06 166 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 CCHCR1Q8TD31 782 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 FAM149B1Q96BN6 582 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 TSSK1BQ9BXA7 367 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 TRIM55Q9BYV6 548 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 YIPF3Q9GZM5 350 aa13.26□□□□□ -0.29
PPP4R1-202ENST00000400555 TRIM49D1C9J1S8 452 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 COPEO14579 308 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 LRCH4O75427 683 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 KRT7P08729 469 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 PDGFRBP09619 1106 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 CDKN2BP42772 138 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 ROR1Q01973 937 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 MORF4L2Q15014 288 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 CEP128Q6ZU80 1094 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 MOB2Q70IA6 237 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 PPIL6Q8IXY8 311 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 PDCD7Q8N8D1 485 aaKnown RBP13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 ARMC2Q8NEN0 867 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 RDM1Q8NG50 284 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 TBC1D10AQ9BXI6 508 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 MANSC1Q9H8J5 431 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 ZNF395Q9H8N7 513 aaPredicted RBP13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 C15orf41Q9Y2V0 281 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 SPDYE16A6NNV3 312 aaPredicted RBP13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 DCTN3O75935 186 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 UNC5CO95185 931 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 PHKA2P46019 1235 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 BCAR1P56945 870 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 FKBP1CQ5VVH2 108 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 ZCCHC23Q6ZST2 131 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 BRSK2Q8IWQ3 736 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 NLRP7Q8WX94 980 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 STMN2Q93045 179 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 ZNF408Q9H9D4 720 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 ELP3Q9H9T3 547 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 USP18Q9UMW8 372 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 TMEM63AO94886 807 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 HAUS5O94927 633 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 ENO1P06733 434 aaKnown RBP13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 SERPINB3P29508 390 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 RASSF2P50749 326 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 YWHAEP62258 255 aaKnown RBP13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 CRADDP78560 199 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 NBPF20Q3BBV1 942 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 SCUBE3Q8IX30 993 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 CPT1BQ92523 772 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 TWNKQ96RR1 684 aa13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 NKX1-2Q9UD57 310 aaPredicted RBP13.25□□□□□ -0.29
PPP4R1-202ENST00000400555 KDELR1P24390 212 aa13.24□□□□□ -0.29
PPP4R1-202ENST00000400555 WDTC1Q8N5D0 677 aa13.24□□□□□ -0.29
PPP4R1-202ENST00000400555 TRPM4Q8TD43 1214 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms