RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 HMGCRP04035 888 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 AXLP30530 894 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 IRX4P78413 519 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 STAT4Q14765 748 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 GEN1Q17RS7 908 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 EPAS1Q99814 870 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 COQ4Q9Y3A0 265 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.68□□□□□ -0.06
SCAF4-202ENST00000399804 GMNCA6NCL1 334 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 E5RJQ4 531 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 GARSP41250 739 aaKnown RBP14.68□□□□□ -0.06
SCAF4-202ENST00000399804 PLEKHO2Q8TD55 490 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 DEPDC1BQ8WUY9 529 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 PLEKHA5Q9HAU0 1116 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 CHST7Q9NS84 486 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 B4GALT4O60513 344 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 SLC39A4Q6P5W5 647 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 FAM47EQ6ZV65 393 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 CCDC33Q8N5R6 958 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 AENQ8WTP8 325 aaKnown RBP14.68□□□□□ -0.06
SCAF4-202ENST00000399804 CAVIN3Q969G5 261 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 AGAP3Q96P47 875 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 APBA2Q99767 749 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 LPXNO60711 386 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 CDH16O75309 829 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 SESN2P58004 480 aaPredicted RBP14.68□□□□□ -0.06
SCAF4-202ENST00000399804 KLHL38Q2WGJ6 581 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 LRRC31Q6UY01 552 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 RAPH1Q70E73 1250 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 THOC1Q96FV9 657 aaKnown RBP14.68□□□□□ -0.06
SCAF4-202ENST00000399804 XPO7Q9UIA9 1087 aaKnown RBP14.68□□□□□ -0.06
SCAF4-202ENST00000399804 C2CD2Q9Y426 696 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 FLT3LGP49771 235 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 SEPT6Q14141 434 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 CNGA2Q16280 664 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 BBS5Q8N3I7 341 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 SLC2A14Q8TDB8 520 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 PPM1EQ8WY54 764 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 SEMA4AQ9H3S1 761 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 DDIT4Q9NX09 232 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 COG5Q9UP83 839 aa14.68□□□□□ -0.06
SCAF4-202ENST00000399804 MDH1P40925 334 aaKnown RBP14.67□□□□□ -0.06
SCAF4-202ENST00000399804 MAP3K7CLP57077 242 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 BST2Q10589 180 aaKnown RBP14.67□□□□□ -0.06
SCAF4-202ENST00000399804 MDH1BQ5I0G3 518 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 FAXCQ5TGI0 409 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 ZNF516Q92618 1163 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 SCYL1Q96KG9 808 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 FIZ1Q96SL8 496 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 NXF3Q9H4D5 531 aaKnown RBP14.67□□□□□ -0.06
SCAF4-202ENST00000399804 APOBEC3GQ9HC16 384 aaKnown RBP14.67□□□□□ -0.06
SCAF4-202ENST00000399804 GDF3Q9NR23 364 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 DDX43Q9NXZ2 648 aaKnown RBP14.67□□□□□ -0.06
SCAF4-202ENST00000399804 MSCO60682 206 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 SPAG7O75391 227 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 RPL21P46778 160 aaKnown RBP14.67□□□□□ -0.06
SCAF4-202ENST00000399804 ARHGAP1Q07960 439 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 C12orf29Q8N999 325 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 TSEN2Q8NCE0 465 aaKnown RBP14.67□□□□□ -0.06
SCAF4-202ENST00000399804 DCLK3Q9C098 648 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 CDY2AQ9Y6F7 541 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 A0A1B0GUL6 1792 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 AGTP01019 485 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 ODC1P11926 461 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 SPARCL1Q14515 664 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 FAM117BQ6P1L5 589 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 PHF13Q86YI8 300 aaPredicted RBP14.67□□□□□ -0.06
SCAF4-202ENST00000399804 ZC3H3Q8IXZ2 948 aaKnown RBP14.67□□□□□ -0.06
SCAF4-202ENST00000399804 PRELID2Q8N945 189 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 STARD7Q9NQZ5 370 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 SMYD2Q9NRG4 433 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 ABI2Q9NYB9 513 aaPredicted RBP14.67□□□□□ -0.06
SCAF4-202ENST00000399804 CHMP2BQ9UQN3 213 aa14.67□□□□□ -0.06
SCAF4-202ENST00000399804 MAP2K7O14733 419 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 PPP1R12AO14974 1030 aaPredicted RBP14.66□□□□□ -0.06
SCAF4-202ENST00000399804 TREHO43280 583 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 RARGP13631 454 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 ATP4AP20648 1035 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 MIPP30301 263 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 MBTD1Q05BQ5 628 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 NR1H3Q13133 447 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 TRADDQ15628 312 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 FOXR1Q6PIV2 292 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 C1orf127Q8N9H9 656 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 LRRC57Q8N9N7 239 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 FBXL18Q96ME1 805 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 BFARQ9NZS9 450 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 TRPV2Q9Y5S1 764 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 EEF2KO00418 725 aaKnown RBP14.66□□□□□ -0.06
SCAF4-202ENST00000399804 C22orf31O95567 290 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 STIP1P31948 543 aaKnown RBP14.66□□□□□ -0.06
SCAF4-202ENST00000399804 CTCFP49711 727 aaPredicted RBP14.66□□□□□ -0.06
SCAF4-202ENST00000399804 IRAK1P51617 712 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 CCDC62Q6P9F0 684 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 C3orf62Q6ZUJ4 267 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 TTC17Q96AE7 1141 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 TUBGCP6Q96RT7 1819 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 FOXP3Q9BZS1 431 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 KRT82Q9NSB4 513 aa14.66□□□□□ -0.06
SCAF4-202ENST00000399804 PAK5Q9P286 719 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms