RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 A0A1W2PPM1 405 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 C2CD4BA6NLJ0 364 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 IL18RAPO95256 599 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 STAU1O95793 577 aaKnown RBP16.17■□□□□ 0.18
CPSF7-202ENST00000394888 HOXA11P31270 313 aaPredicted RBP16.17■□□□□ 0.18
CPSF7-202ENST00000394888 RASA2Q15283 850 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 SURF1Q15526 300 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 MICALCLQ6ZW33 695 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 ANKRD13AQ8IZ07 590 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 MAK16Q9BXY0 300 aaKnown RBP16.17■□□□□ 0.18
CPSF7-202ENST00000394888 DDX56Q9NY93 547 aaKnown RBP16.17■□□□□ 0.18
CPSF7-202ENST00000394888 FNDC1Q4ZHG4 1894 aaPredicted RBP16.17■□□□□ 0.18
CPSF7-202ENST00000394888 INO80B-WBP1J3KQ70 363 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 CDH16O75309 829 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 KRT3P12035 628 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 BRAFP15056 766 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 ZBTB6Q15916 424 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 EFHC2Q5JST6 749 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 NPNTQ6UXI9 565 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 CPLX4Q7Z7G2 160 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 TMEM176AQ96HP8 235 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 MS4A4AQ96JQ5 239 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 PPP1R16BQ96T49 567 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 TCHPQ9BT92 498 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 INO80BQ9C086 356 aaPredicted RBP16.17■□□□□ 0.18
CPSF7-202ENST00000394888 SAYSD1Q9NPB0 183 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 SHOC2Q9UQ13 582 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 LRRD1A4D1F6 860 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 PRPF4O43172 522 aaKnown RBP eCLIP16.17■□□□□ 0.189e-7■■■■■ 34.9
CPSF7-202ENST00000394888 MCF2P10911 925 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 TFE3P19532 575 aaPredicted RBP16.17■□□□□ 0.18
CPSF7-202ENST00000394888 STAT4Q14765 748 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 MGARPQ8TDB4 240 aa16.17■□□□□ 0.18
CPSF7-202ENST00000394888 GOLGA8SH3BPF8 625 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 HCRTO43612 131 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 C12orf29Q8N999 325 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 CCDC197Q8NCU1 140 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 LPIN3Q9BQK8 851 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 FOXP3Q9BZS1 431 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 ZWILCHQ9H900 591 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 USP29Q9HBJ7 922 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 GBA2Q9HCG7 927 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-202ENST00000394888 MGRN1O60291 552 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 ZNF268Q14587 947 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-202ENST00000394888 RNF187Q5TA31 235 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-202ENST00000394888 ZNF365Q70YC5 407 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 ASRGL1Q7L266 308 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 TTC30AQ86WT1 665 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 SRRM1Q8IYB3 904 aaKnown RBP16.16■□□□□ 0.18
CPSF7-202ENST00000394888 FITM2Q8N6M3 262 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 PPTC7Q8NI37 304 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 MAGEB5Q9BZ81 275 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 A0A1B0GUA9 196 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 PSMA2P25787 234 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 SLC18A1P54219 525 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 SLC1A5Q15758 541 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 CYP4F22Q6NT55 531 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 MTHFD1LQ6UB35 978 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 OLFML1Q6UWY5 402 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 ALKAL1Q6UXT8 129 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 FAM183BPQ6ZVS7 135 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 TAOK1Q7L7X3 1001 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 GDAP1Q8TB36 358 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 DCAKDQ8WVC6 231 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 ANKRD36BP1Q96IX9 119 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 PHACTR1Q9C0D0 580 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 ADAMTS10Q9H324 1103 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 MROH8Q9H579 483 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 ACTR5Q9H9F9 607 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-202ENST00000394888 CDHR5Q9HBB8 845 aa16.16■□□□□ 0.18
CPSF7-202ENST00000394888 CST8O60676 142 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 IREB2P48200 963 aaKnown RBP16.15■□□□□ 0.18
CPSF7-202ENST00000394888 PSMC1P62191 440 aaKnown RBP16.15■□□□□ 0.18
CPSF7-202ENST00000394888 DPYSL3Q14195 570 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 RGS9BPQ6ZS82 235 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 PQLC3Q8N755 202 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 SHCBP1Q8NEM2 672 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 ERAP1Q9NZ08 941 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 GGT7Q9UJ14 662 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 ZNF148Q9UQR1 794 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 LOC102724159A0A0B4J2E5 919 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 POLR2BP30876 1174 aaKnown RBP16.15■□□□□ 0.18
CPSF7-202ENST00000394888 NCALDP61601 193 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 ADCY1Q08828 1119 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 PWP2Q15269 919 aaKnown RBP16.15■□□□□ 0.18
CPSF7-202ENST00000394888 C15orf59Q2T9L4 293 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-202ENST00000394888 BBOF1Q8ND07 529 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 PRMT7Q9NVM4 692 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-202ENST00000394888 PNMA3Q9UL41 463 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 NOP56O00567 594 aaKnown RBP16.15■□□□□ 0.18
CPSF7-202ENST00000394888 NPTXRO95502 500 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 CTCFP49711 727 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-202ENST00000394888 TRPC3Q13507 836 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 KCNJ11Q14654 390 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 CCDC14Q49A88 953 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 TRPM8Q7Z2W7 1104 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 UBA3Q8TBC4 463 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 MAGEB18Q96M61 343 aa16.15■□□□□ 0.18
CPSF7-202ENST00000394888 RPF1Q9H9Y2 349 aaKnown RBP16.15■□□□□ 0.18
CPSF7-202ENST00000394888 KANSL3Q9P2N6 904 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms