RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TDRD3Q9H7E2 651 aaKnown RBP15.27■□□□□ 0.04
CCDC50-201ENST00000392455 SNX24Q9Y343 169 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 BAZ2BQ9UIF8 2168 aaKnown RBP15.27■□□□□ 0.04
CCDC50-201ENST00000392455 ADCY6O43306 1168 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 GUCY1B2O75343 617 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 CDH6P55285 790 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 MAD2L1Q13257 205 aaPredicted RBP15.27■□□□□ 0.03
CCDC50-201ENST00000392455 NFIL3Q16649 462 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 SWSAP1Q6NVH7 229 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 LONP2Q86WA8 852 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 EMILIN2Q9BXX0 1053 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 EFCAB1Q9HAE3 211 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF335Q9H4Z2 1342 aaPredicted RBP15.27■□□□□ 0.03
CCDC50-201ENST00000392455 OPLAHO14841 1288 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 ANXA6P08133 673 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 PYHIN1Q6K0P9 492 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 HAUS6Q7Z4H7 955 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 IZUMO1Q8IYV9 350 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 CXorf56Q9H5V9 222 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 VPS51Q9UID3 782 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 ATP1A3P13637 1013 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 EIF3EP60228 445 aaKnown RBP15.27■□□□□ 0.03
CCDC50-201ENST00000392455 RIPPLY1Q0D2K3 151 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 GALNT3Q14435 633 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 FAM102AQ5T9C2 384 aaPredicted RBP15.27■□□□□ 0.03
CCDC50-201ENST00000392455 ZFP1Q6P2D0 407 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 ILKAPQ9H0C8 392 aaPredicted RBP15.27■□□□□ 0.03
CCDC50-201ENST00000392455 TPRKBQ9Y3C4 175 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 IRAK3Q9Y616 596 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 PLEKHG1Q9ULL1 1385 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 LRRC14BA6NHZ5 514 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 NOS3P29474 1203 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 FEN1P39748 380 aaKnown RBP15.27■□□□□ 0.03
CCDC50-201ENST00000392455 CBFBQ13951 182 aa15.27■□□□□ 0.03
CCDC50-201ENST00000392455 PRPF39Q86UA1 669 aaKnown RBP15.27■□□□□ 0.03
CCDC50-201ENST00000392455 NFICP08651 508 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 HLFQ16534 295 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 DGUOKQ16854 277 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 PFKFB3Q16875 520 aaPredicted RBP15.26■□□□□ 0.03
CCDC50-201ENST00000392455 NPHS2Q9NP85 383 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 SNRPFP62306 86 aaKnown RBP15.26■□□□□ 0.03
CCDC50-201ENST00000392455 PLEKHA7Q6IQ23 1121 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 TRAPPC11Q7Z392 1133 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 CCDC33Q8N5R6 958 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 PIK3R5Q8WYR1 880 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 COMMD8Q9NX08 183 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 TRIM10Q9UDY6 481 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 LNPEPQ9UIQ6 1025 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF112Q9UJU3 913 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 TSC22D2O75157 780 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 SASH1O94885 1247 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 CASP1P29466 404 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 FCHO2Q0JRZ9 810 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 CYFIP1Q7L576 1253 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 PALB2Q86YC2 1186 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 CACTIN-AS1Q8N1I8 211 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF333Q96JL9 665 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 KLHL4Q9C0H6 718 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 GABBR1Q9UBS5 961 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 KIF28PB7ZC32 967 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 GRK4P32298 578 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 CAMK1Q14012 370 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 KYNUQ16719 465 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 SEPT12Q8IYM1 358 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 RNF25Q96BH1 459 aaPredicted RBP15.26■□□□□ 0.03
CCDC50-201ENST00000392455 PRKD2Q9BZL6 878 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 TMEM260Q9NX78 707 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 METP08581 1390 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 PRCPP42785 496 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 MYO3BQ8WXR4 1341 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 MAGI2Q86UL8 1455 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 POTECB2RU33 542 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 USP17L10C9JJH3 530 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 KCNN4O15554 427 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 CBFA2T3O75081 653 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 SNRPAP09012 282 aaKnown RBP15.26■□□□□ 0.03
CCDC50-201ENST00000392455 LCP1P13796 627 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 CASP4P49662 377 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 STARP49675 285 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF483Q8TF39 744 aaPredicted RBP15.26■□□□□ 0.03
CCDC50-201ENST00000392455 CPVLQ9H3G5 476 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 TASP1Q9H6P5 420 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 POLD4Q9HCU8 107 aa15.26■□□□□ 0.03
CCDC50-201ENST00000392455 FAM217BQ9NTX9 383 aaPredicted RBP15.26■□□□□ 0.03
CCDC50-201ENST00000392455 C2orf81A6NN90 581 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 GOLPH3Q9H4A6 298 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 IPPQ9Y573 584 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 TMEM114B3SHH9 223 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 APRTP07741 180 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 TRAP1Q12931 704 aaKnown RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 EPHX4Q8IUS5 362 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 DHX35Q9H5Z1 703 aaKnown RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 GALNT18Q6P9A2 607 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 CASP12Q6UXS9 341 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 CYB5R4Q7L1T6 521 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 NSUN6Q8TEA1 469 aaKnown RBP15.25■□□□□ 0.03
CCDC50-201ENST00000392455 C11orf70Q9BRQ4 267 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 KCNH4Q9UQ05 1017 aa15.25■□□□□ 0.03
CCDC50-201ENST00000392455 DISP1Q96F81 1524 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms