RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 CD302Q8IX05 232 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 DIS3LQ8TF46 1054 aaKnown RBP9.93□□□□□ -0.82
SNX1-202ENST00000380285 VPS33AQ96AX1 596 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 FAM84BQ96KN1 310 aaPredicted RBP9.93□□□□□ -0.82
SNX1-202ENST00000380285 CDC42EP4Q9H3Q1 356 aaKnown RBP9.93□□□□□ -0.82
SNX1-202ENST00000380285 CD274Q9NZQ7 290 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 SLIT1O75093 1534 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 MPOP05164 745 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 MYBP10242 640 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 FDPSP14324 419 aaKnown RBP9.93□□□□□ -0.82
SNX1-202ENST00000380285 RGS2P41220 211 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 STAT5BP51692 787 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 CACNA2D1P54289 1103 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 NCF4Q15080 339 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 TTLL9Q3SXZ7 439 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 EPS8L3Q8TE67 593 aaKnown RBP9.93□□□□□ -0.82
SNX1-202ENST00000380285 GTF3C2Q8WUA4 911 aaPredicted RBP9.93□□□□□ -0.82
SNX1-202ENST00000380285 SH3KBP1Q96B97 665 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 GANQ9H2C0 597 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 SMARCAD1Q9H4L7 1026 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 PRDM16Q9HAZ2 1276 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 PRMT7Q9NVM4 692 aaPredicted RBP9.93□□□□□ -0.82
SNX1-202ENST00000380285 SLC30A1Q9Y6M5 507 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 F8VZ95 297 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 NCAM2O15394 837 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 UBOX5O94941 541 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 PCSK1P29120 753 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 KYQ8NBH2 561 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 ZNF333Q96JL9 665 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 BDH2Q9BUT1 245 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 RHBDL2Q9NX52 303 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 BTBD7Q9P203 1132 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 RABGEF1Q9UJ41 708 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 IFNA14P01570 189 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 GTF2H3Q13889 308 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 TTI2Q6NXR4 508 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 AENQ8WTP8 325 aaKnown RBP9.93□□□□□ -0.82
SNX1-202ENST00000380285 CEP44Q9C0F1 390 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 NCKIPSDQ9NZQ3 722 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 ABLIM1O14639 778 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 Q3C1V9 767 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 KHDRBS2Q5VWX1 349 aaKnown RBP9.93□□□□□ -0.82
SNX1-202ENST00000380285 IYDQ6PHW0 289 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 SP8Q8IXZ3 490 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 PCDH9Q9HC56 1237 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 PKP3Q9Y446 797 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 RNF103O00237 685 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 CYP27B1O15528 508 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 NCKAP1LP55160 1127 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 IZUMO2Q6UXV1 221 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 EEPD1Q7L9B9 569 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 SLC44A5Q8NCS7 719 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 ZNF398Q8TD17 642 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 BBS2Q9BXC9 721 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 LRRC40Q9H9A6 602 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 LMTK2Q8IWU2 1503 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 ATP9AO75110 1047 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 BCL10O95999 233 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 RARBP10826 455 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 POU4F1Q01851 419 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 CCDC142Q17RM4 750 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 MRNIPQ6NTE8 343 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 ZNF662Q6ZS27 426 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 NUDT18Q6ZVK8 323 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 TTLL6Q8N841 843 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 RGL1Q9NZL6 768 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 NPHP3-ACAD11A0A0J9YXS1 232 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 TK2O00142 265 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 TGM2P21980 687 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 CDK7P50613 346 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 CUL2Q13617 745 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 TIGD7Q6NT04 549 aaPredicted RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 LRRC74BQ6ZQY2 392 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 ST13P5Q8NFI4 369 aaPredicted RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 OSCP1Q8WVF1 389 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 VCPIP1Q96JH7 1222 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 SPATA16Q9BXB7 569 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 TMEM120AQ9BXJ8 343 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 CNGB3Q9NQW8 809 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 AGPAT3Q9NRZ7 376 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 ACTL7BQ9Y614 415 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 VIRMAQ69YN4 1812 aaKnown RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 A0A087X0T9 212 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 TBKBP1A7MCY6 615 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 LIN7AO14910 233 aaPredicted RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 FAM228BP0C875 321 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 MAPTP10636 758 aaKnown RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 GARTP22102 1010 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 SNAP25P60880 206 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 MTA1Q13330 715 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 C1DQ13901 141 aaKnown RBP9.92□□□□□ -0.82
SNX1-202ENST00000380285 ERO1BQ86YB8 467 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 RNF149Q8NC42 400 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 SIK2Q9H0K1 926 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 FANCEQ9HB96 536 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 CACNA1FO60840 1977 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 VPS4BO75351 444 aa9.92□□□□□ -0.82
SNX1-202ENST00000380285 KATNA1O75449 491 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms