RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SCN4BQ8IWT1 228 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 DDIASQ8IXT1 998 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 AGR3Q8TD06 166 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 TRPM4Q8TD43 1214 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 SCFD2Q8WU76 684 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 HDAC7Q8WUI4 952 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 FAM118BQ9BPY3 351 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 UNC45AQ9H3U1 944 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 PLEKHA5Q9HAU0 1116 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 HAO1Q9UJM8 370 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 FZD1Q9UP38 647 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 SLC8A2Q9UPR5 921 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 SHOC2Q9UQ13 582 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 E5RI56 91 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 AIM2O14862 343 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 ZBTB24O43167 697 aaPredicted RBP8.73□□□□□ -1.01
VPS36-201ENST00000378060 FKBP6O75344 327 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 STX5Q13190 355 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 ANO4Q32M45 955 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 EPC2Q52LR7 807 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 EFHC1Q5JVL4 640 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 HABP4Q5JVS0 413 aaKnown RBP8.73□□□□□ -1.01
VPS36-201ENST00000378060 WASHC2DQ5SRD0 308 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 PRAMEF18Q5VWM3 479 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 FAM71DQ8N9W8 422 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 CENPTQ96BT3 561 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 GMCL1Q96IK5 515 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 FAM111AQ96PZ2 611 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 TARS2Q9BW92 718 aaKnown RBP8.73□□□□□ -1.01
VPS36-201ENST00000378060 SIK2Q9H0K1 926 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 TASP1Q9H6P5 420 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 A0A087X0B3 334 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 H0Y626 953 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 TRAPPC3O43617 180 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 TRIM16O95361 564 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 LCP1P13796 627 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 GFAPP14136 432 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 CNTFP26441 200 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 PCYT1AP49585 367 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 CAPRIN1Q14444 709 aaKnown RBP8.73□□□□□ -1.01
VPS36-201ENST00000378060 AASDHQ4L235 1098 aaPredicted RBP8.73□□□□□ -1.01
VPS36-201ENST00000378060 EARS2Q5JPH6 523 aaKnown RBP8.73□□□□□ -1.01
VPS36-201ENST00000378060 BTBD8Q5XKL5 378 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 LRRC8BQ6P9F7 803 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 OR9Q1Q8NGQ5 310 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 DDI1Q8WTU0 396 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 ATG4AQ8WYN0 398 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 PTPRN2Q92932 1015 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 ATXN7L3BQ96GX2 97 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 PI4K2AQ9BTU6 479 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 TRIM54Q9BYV2 358 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 EHD4Q9H223 541 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 TBC1D23Q9NUY8 699 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 SLC13A4Q9UKG4 626 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 AURKCQ9UQB9 309 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 CDYLQ9Y232 598 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 ECM29Q5VYK3 1845 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 RIPK2O43353 540 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 DNAJC6O75061 913 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 ATP6V1G2O95670 118 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 LSM8O95777 96 aaKnown RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 CDH2P19022 906 aaPredicted RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 PRKCIP41743 596 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 ARPP19P56211 112 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 DSG1Q02413 1049 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 KBTBD12Q3ZCT8 623 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 TMEM119Q4V9L6 283 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 NT5DC3Q86UY8 548 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 CDC26Q8NHZ8 85 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 VCPIP1Q96JH7 1222 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 AGAP3Q96P47 875 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 ILKAPQ9H0C8 392 aaPredicted RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 GID8Q9NWU2 228 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 DCDC2Q9UHG0 476 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 F5H423 210 aaPredicted RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 NEMP1O14524 444 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 DEAF1O75398 565 aaPredicted RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 TMCC1O94876 653 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 CD4P01730 458 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 THRAP10827 490 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 ITGA4P13612 1032 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 RRM1P23921 792 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 GRK2P25098 689 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 RGS7P49802 495 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 SULT1E1P49888 294 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 RHBDL3P58872 404 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 MKRN4PQ13434 485 aaPredicted RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 PDK2Q15119 407 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 TRMT5Q32P41 509 aaKnown RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 MROH9Q5TGP6 573 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 ATF7IP2Q5U623 682 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 SLC26A11Q86WA9 606 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 CBWD2Q8IUF1 395 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 SLC35C1Q96A29 364 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 TMA16Q96EY4 203 aaKnown RBP8.72□□□□□ -1.01
VPS36-201ENST00000378060 PNMA5Q96PV4 448 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 NAALADL1Q9UQQ1 740 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 SIK3Q9Y2K2 1263 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 LOC100653049A0A140TA62 436 aa8.72□□□□□ -1.01
VPS36-201ENST00000378060 TRPC5OSA6NMA1 111 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms