RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 WRNIP1Q96S55 665 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 FAM192AQ9GZU8 254 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 SHOC2Q9UQ13 582 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 E9PBE3 544 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 KLHL41O60662 606 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 UNC5CO95185 931 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 TFE3P19532 575 aaPredicted RBP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 MXD4Q14582 209 aaPredicted RBP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 BOLA3Q53S33 107 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 SLC35C1Q96A29 364 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 PCDH9Q9HC56 1237 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 GPRC5CQ9NQ84 441 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 C2CD2Q9Y426 696 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 DIP2AQ14689 1571 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 TMEM247A6NEH6 219 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 EPHB6O15197 1021 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 ZC3H11AO75152 810 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 H2AFYO75367 372 aaKnown RBP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 TMCC1O94876 653 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 CDH2P19022 906 aaPredicted RBP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 PSMA4P25789 261 aaKnown RBP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 KBTBD12Q3ZCT8 623 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 TAS1R2Q8TE23 839 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 TFB1MQ8WVM0 346 aaKnown RBP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 MED15Q96RN5 788 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 DNAJC18Q9H819 358 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 MEI4A8MW99 385 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 PSMG1O95456 288 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 FDFT1P37268 417 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 PTGER2P43116 358 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 AUHQ13825 339 aaKnown RBP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 BMPR2Q13873 1038 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 Q4G0T1 1027 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 DENND5BQ6ZUT9 1274 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 NT5C1AQ9BXI3 368 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 FAM58BPP0C7Q3 252 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 RALBP11234 206 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 SREBF1P36956 1147 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 PBX1P40424 430 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 RNF217Q8TC41 542 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 TARS2Q9BW92 718 aaKnown RBP16.52■□□□□ 0.24
COL17A1-202ENST00000369733 FAM49BQ9NUQ9 324 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 ARMCX1Q9P291 453 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 APPL1Q9UKG1 709 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 BNIP3LO60238 219 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 RPL10AP62906 217 aaKnown RBP16.52■□□□□ 0.24
COL17A1-202ENST00000369733 TSPY1Q01534 308 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 TAS2R42Q7RTR8 314 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 SIKE1Q9BRV8 207 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 AP1G2O75843 785 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 MAP3K6O95382 1288 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 NR3C2P08235 984 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 FAM200BP0CF97 657 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 GYS1P13807 737 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 PECAM1P16284 738 aaPredicted RBP16.52■□□□□ 0.24
COL17A1-202ENST00000369733 ADRA2BP18089 450 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 VCPP55072 806 aaKnown RBP16.52■□□□□ 0.24
COL17A1-202ENST00000369733 KCNK10P57789 538 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 CDK16Q00536 496 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 DMC1Q14565 340 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 HHIPL2Q6UWX4 724 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 SGF29Q96ES7 293 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 MCM8Q9UJA3 840 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 STARD13Q9Y3M8 1113 aa16.52■□□□□ 0.24
COL17A1-202ENST00000369733 USP1O94782 785 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 MUTP22033 750 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 SERPINB8P50452 374 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 MAP3K10Q02779 954 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 PTK6Q13882 451 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 TTLL4Q14679 1199 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 RRP1BQ14684 758 aaKnown RBP16.52■□□□□ 0.23
COL17A1-202ENST00000369733 GOLGA7BQ2TAP0 167 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 RNF43Q68DV7 783 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 ARHGEF19Q8IW93 802 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 NUDT12Q9BQG2 462 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 RPS6KL1Q9Y6S9 549 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 KDM6AO15550 1401 aaPredicted RBP16.52■□□□□ 0.23
COL17A1-202ENST00000369733 CCDC85BQ15834 202 aaPredicted RBP16.52■□□□□ 0.23
COL17A1-202ENST00000369733 ATPAF2Q8N5M1 289 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 APOPT1Q96IL0 206 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 SOX13Q9UN79 622 aa16.52■□□□□ 0.23
COL17A1-202ENST00000369733 GRK2P25098 689 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 HMOX2P30519 316 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 AADACL2Q6P093 401 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 MCOLN2Q8IZK6 566 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 CATSPER2Q96P56 530 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 RIOX1Q9H6W3 641 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 C17orf75Q9HAS0 396 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 TEKT2Q9UIF3 430 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 KLRC4O43908 158 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 IL18RAPO95256 599 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 NUP107P57740 925 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 SEL1L3Q68CR1 1132 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 KIAA1683Q9H0B3 1180 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 DDX18Q9NVP1 670 aaKnown RBP16.51■□□□□ 0.23
COL17A1-202ENST00000369733 MYO1GB0I1T2 1018 aa16.51■□□□□ 0.23
COL17A1-202ENST00000369733 CNTFP26441 200 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms