RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 KLHL2O95198 593 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 EEF1B2P24534 225 aaKnown RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 ACADSBP45954 432 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 HSD17B4P51659 736 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 FMO1Q01740 532 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 PTPN11Q06124 597 aaPredicted RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 NSUN2Q08J23 767 aaKnown RBP eCLIP12.17□□□□□ -0.46
COPA-202ENST00000368069 AUHQ13825 339 aaKnown RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 RRP1BQ14684 758 aaKnown RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 ZCWPW2Q504Y3 356 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 BTBD8Q5XKL5 378 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 FAM172AQ8WUF8 416 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 FGD4Q96M96 766 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 LRFN2Q9ULH4 789 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 STAG3L1P0CL83 205 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 CXCL8P10145 99 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 FLT3P36888 993 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 USP10Q14694 798 aaKnown RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 GLRA4Q5JXX5 417 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 TMEM154Q6P9G4 183 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 CNPY4Q8N129 248 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 SLC7A14Q8TBB6 771 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 MAGEB5Q9BZ81 275 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 TASP1Q9H6P5 420 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 PGK2P07205 417 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 MYL2P10916 166 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 KCNA3P22001 575 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 GNL1P36915 607 aaPredicted RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 RCN1Q15293 331 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 PKN2Q16513 984 aaKnown RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 ERMARDQ5T6L9 678 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 DENND5BQ6ZUT9 1274 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 IL31RAQ8NI17 732 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 RXFP2Q8WXD0 754 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 SHC3Q92529 594 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 CNPY3Q9BT09 278 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 GLIS2Q9BZE0 524 aaPredicted RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 MRPL40Q9NQ50 206 aaKnown RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 C20orf96Q9NUD7 363 aaPredicted RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 SUFUQ9UMX1 484 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 KDM3BQ7LBC6 1761 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 LOC100653049A0A140TA62 436 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 ZNF189O75820 626 aaPredicted RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 KRT34O76011 436 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 CD4P01730 458 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 LAMTOR4Q0VGL1 99 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 RARS2Q5T160 578 aaKnown RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 TFB1MQ8WVM0 346 aaKnown RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 MRIQ9BWK5 157 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 SP110Q9HB58 689 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 PARP4Q9UKK3 1724 aaKnown RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 WNT10BO00744 389 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 PYGBP11216 843 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 ITGB5P18084 799 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 BGNP21810 368 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 SSTR1P30872 391 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 PDK2Q15119 407 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 EFHC1Q5JVL4 640 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 TMCO4Q5TGY1 634 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 FUKQ8N0W3 1084 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 PPHLN1Q8NEY8 458 aaKnown RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 ABCF3Q9NUQ8 709 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 SRRM3A6NNA2 597 aaPredicted RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 ZSCAN5DPP0CG00 497 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 ENO3P13929 434 aaPredicted RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 DSG3P32926 999 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 VHLP40337 213 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 YTHDF3Q7Z739 585 aaKnown RBP12.16□□□□□ -0.46
COPA-202ENST00000368069 SLC26A11Q86WA9 606 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 KATNAL2Q8IYT4 538 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 TEX9Q8N6V9 391 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 TMEM161BQ8NDZ6 487 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 CENPTQ96BT3 561 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 TMEM176AQ96HP8 235 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 SHCBP1LQ9BZQ2 653 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 TMEM51Q9NW97 253 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 L3MBTL1Q9Y468 752 aa12.16□□□□□ -0.46
COPA-202ENST00000368069 LRRC37A3O60309 1634 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 CSDE1O75534 798 aaKnown RBP12.15□□□□□ -0.46
COPA-202ENST00000368069 CNGA2Q16280 664 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 FBXO16Q8IX29 292 aaPredicted RBP12.15□□□□□ -0.46
COPA-202ENST00000368069 OLFM3Q96PB7 478 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.15□□□□□ -0.46
COPA-202ENST00000368069 F8VP50 259 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 AIM2O14862 343 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 NUDT17P0C025 328 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 DRG2P55039 364 aaKnown RBP12.15□□□□□ -0.46
COPA-202ENST00000368069 CACNB2Q08289 660 aaPredicted RBP12.15□□□□□ -0.46
COPA-202ENST00000368069 TSTA3Q13630 321 aaPredicted RBP12.15□□□□□ -0.46
COPA-202ENST00000368069 BMPR2Q13873 1038 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 KIAA1841Q6NSI8 718 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 CMTM5Q96DZ9 223 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 CPB2Q96IY4 423 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 KCNK16Q96T55 309 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 TMEM120AQ9BXJ8 343 aa12.15□□□□□ -0.46
COPA-202ENST00000368069 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.15□□□□□ -0.462e-6■□□□□ 8.1
COPA-202ENST00000368069 ELK3P41970 407 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms