RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 KLRC1P26715 233 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 CARSP49589 748 aaKnown RBP6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 SLFN5Q08AF3 891 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 STARD3Q14849 445 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 NOMO2Q5JPE7 1267 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 DCAF12L1Q5VU92 463 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 CCDC174Q6PII3 467 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 ZFPM1Q8IX07 1006 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 TXLNBQ8N3L3 684 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 TCP11L2Q8N4U5 519 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 FAM46DQ8NEK8 389 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 ZNF566Q969W8 418 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 CDK19Q9BWU1 502 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 TTLL2Q9BWV7 592 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 STK31Q9BXU1 1019 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 CHST8Q9H2A9 424 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 XPR1Q9UBH6 696 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 ITGB1BP2Q9UKP3 347 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 MORC2Q9Y6X9 1032 aaPredicted RBP6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 POLR3AO14802 1390 aaPredicted RBP6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 PLCH1Q4KWH8 1693 aa6.68□□□□□ -1.34
RNU4-39P-201ENST00000362455 SSH2Q76I76 1423 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 KNDC1Q76NI1 1749 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 TULP4Q9NRJ4 1543 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 THAP12O43422 761 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 FOXS1O43638 330 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 CKBP12277 381 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 FCER1AP12319 257 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 TYRP1P17643 537 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 BMP7P18075 431 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 EEF1GP26641 437 aaKnown RBP6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 TCF15Q12870 199 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 TBC1D10BQ4KMP7 808 aaPredicted RBP6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 AMOTQ4VCS5 1084 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 DCAF17Q5H9S7 520 aaPredicted RBP6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 FAM160B1Q5W0V3 765 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 RNF44Q7L0R7 432 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 BEND5Q7L4P6 421 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 PPP1R32Q7Z5V6 425 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 DNERQ8NFT8 737 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 NUP133Q8WUM0 1156 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 ATXN2LQ8WWM7 1075 aaKnown RBP6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 MIEF2Q96C03 454 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 CNPPD1Q9BV87 410 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 SPATA5L1Q9BVQ7 753 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 ACEP12821 1306 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 CAMTA1Q9Y6Y1 1673 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 PARD3Q8TEW0 1356 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 TRPM3Q9HCF6 1732 aaPredicted RBP6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 NWD2Q9ULI1 1742 aa6.67□□□□□ -1.34
RNU4-39P-201ENST00000362455 ATP7BP35670 1465 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 ADGRB2O60241 1585 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 GPR42O15529 346 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 PLA2G6O60733 806 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 PLATP00750 562 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 GCP02774 474 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 TXNP10599 105 aaKnown RBP6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 FDXRP22570 491 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 GCSHP23434 173 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 CHKAP35790 457 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 C1QL3Q5VWW1 255 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 SPTY2D1Q68D10 685 aaPredicted RBP6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 POLNQ7Z5Q5 900 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 ANKRD35Q8N283 1001 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 FANCBQ8NB91 859 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 MYRIPQ8NFW9 859 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 KCNC2Q96PR1 638 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 MS4A7Q9GZW8 240 aaPredicted RBP6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 ZNF212Q9UDV6 495 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 MAGED2Q9UNF1 606 aaPredicted RBP6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 CDYLQ9Y232 598 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 MAN2B2Q9Y2E5 1009 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 ABCA3Q99758 1704 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 IFT172Q9UG01 1749 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 UTRNP46939 3433 aa6.66□□□□□ -1.34
RNU4-39P-201ENST00000362455 ALS2Q96Q42 1657 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 CLCA1A8K7I4 914 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 VPS4BO75351 444 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 RASSF9O75901 435 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 ZSCAN22P10073 491 aaPredicted RBP6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 RABGGTBP53611 331 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 ICA1Q05084 483 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 ELF2Q15723 593 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 PDCD2Q16342 344 aaPredicted RBP6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 RRAGBQ5VZM2 374 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 METRNLQ641Q3 311 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 PGBD2Q6P3X8 592 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 CATSPERGQ6ZRH7 1159 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 LIMS2Q7Z4I7 341 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 SIAH1Q8IUQ4 282 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 CFAP52Q8N1V2 620 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 SDR16C5Q8N3Y7 309 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 NKAPQ8N5F7 415 aaKnown RBP6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 ZNF527Q8NB42 609 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 RAPGEF4Q8WZA2 1011 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 SPSB4Q96A44 273 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 MARS2Q96GW9 593 aaKnown RBP6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 NEU1Q99519 415 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 STK33Q9BYT3 514 aa6.65□□□□□ -1.34
RNU4-39P-201ENST00000362455 REXO4Q9GZR2 422 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms