RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 MDH1P40925 334 aaKnown RBP17■□□□□ 0.31
PTCH1-201ENST00000331920 GPSM2P81274 684 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 CHRNB3Q05901 458 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 PTK6Q13882 451 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 ING3Q9NXR8 418 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17■□□□□ 0.31
PTCH1-201ENST00000331920 WBP11Q9Y2W2 641 aaKnown RBP17■□□□□ 0.31
PTCH1-201ENST00000331920 IGF2BP3O00425 579 aaKnown RBP eCLIP17■□□□□ 0.31
PTCH1-201ENST00000331920 GUCY1B2O75343 617 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 SOAT2O75908 522 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 ZNF671Q8TAW3 534 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 FAR2Q96K12 515 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 SH2D3AQ9BRG2 576 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 CXorf56Q9H5V9 222 aa17■□□□□ 0.31
PTCH1-201ENST00000331920 STX7O15400 261 aaKnown RBP16.99■□□□□ 0.31
PTCH1-201ENST00000331920 TIMM44O43615 452 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 CYP21A2P08686 494 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 PDGFRAP16234 1089 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 TMEM132DQ14C87 1099 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 AMHR2Q16671 573 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 CCSER1Q9C0I3 900 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 SLITRK2Q9H156 845 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 GJB4Q9NTQ9 266 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 LRG1P02750 347 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 FNTAP49354 379 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 TRPM5Q9NZQ8 1165 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 MAPK10P53779 464 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 FAM83EQ2M2I3 478 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 PMF1Q6P1K2 205 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 NSL1Q96IY1 281 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 SUPT7LO94864 414 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 BTBD9Q96Q07 612 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 AGPAT1Q99943 283 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 TMEM138Q9NPI0 162 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 KHDRBS3O75525 346 aaKnown RBP16.99■□□□□ 0.31
PTCH1-201ENST00000331920 VCLP18206 1134 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 FBXO42Q6P3S6 717 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 SAPCD2Q86UD0 394 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 UBA3Q8TBC4 463 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 EIF2AK1Q9BQI3 630 aaKnown RBP16.99■□□□□ 0.31
PTCH1-201ENST00000331920 CEP44Q9C0F1 390 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 RRN3P2A6NIE6 340 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 KRT33AO76009 404 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 GLRBP48167 497 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 TCEA2Q15560 299 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 ERMARDQ5T6L9 678 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 ZCCHC8Q6NZY4 707 aaKnown RBP16.99■□□□□ 0.31
PTCH1-201ENST00000331920 FOXP3Q9BZS1 431 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 IL1RAPL1Q9NZN1 696 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 PRKAG3Q9UGI9 489 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 MICAL3Q7RTP6 2002 aa16.99■□□□□ 0.31
PTCH1-201ENST00000331920 ASS1P00966 412 aaKnown RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 CTCFP49711 727 aaPredicted RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 KYNUQ16719 465 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 OR2W6PQ8NHA6 318 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 DCAF4Q8WV16 495 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 MAFFQ9ULX9 164 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 H3BN98 237 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 PRODHO43272 600 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 PCCAP05165 728 aaPredicted RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 SIK1P57059 783 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 TMEM179Q6ZVK1 233 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 RD3Q7Z3Z2 195 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 LRRC1Q9BTT6 524 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 TDRKHQ9Y2W6 561 aaKnown RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 MORC2Q9Y6X9 1032 aaPredicted RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 KCNA6P17658 529 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 ARL6IP4Q66PJ3 421 aaKnown RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 NSUN6Q8TEA1 469 aaKnown RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 AHCYL2Q96HN2 611 aaKnown RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 ABI2Q9NYB9 513 aaPredicted RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 DUSP12Q9UNI6 340 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 ZBTB5O15062 677 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 LLGL2Q6P1M3 1020 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 BHLHE41Q9C0J9 482 aaPredicted RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 EPS8L2Q9H6S3 715 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 ENTPD7Q9NQZ7 604 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 ZMYM4Q5VZL5 1548 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 NMT2O60551 498 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 PAICSP22234 425 aaKnown RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 ARHGAP15Q53QZ3 475 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 CCT8L2Q96SF2 557 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 QTRT2Q9H974 415 aaKnown RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 NAGPAQ9UK23 515 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 C2orf81A6NN90 581 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 POLD3Q15054 466 aaPredicted RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 DYRK1BQ9Y463 629 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 PCP4L1A6NKN8 68 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 STARP49675 285 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 CCNG1P51959 295 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 NUP107P57740 925 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 OASLQ15646 514 aaKnown RBP16.98■□□□□ 0.31
PTCH1-201ENST00000331920 IKBIPQ70UQ0 350 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 FAM228AQ86W67 206 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 HPS6Q86YV9 775 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 SLC35C2Q9NQQ7 365 aa16.98■□□□□ 0.31
PTCH1-201ENST00000331920 ECDO95905 644 aaPredicted RBP16.97■□□□□ 0.31
PTCH1-201ENST00000331920 JAK1P23458 1154 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms