RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 TMCO4Q5TGY1 634 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 C1orf228Q6PIY5 440 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 ATP11CQ8NB49 1132 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 CNBD2Q96M20 576 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 PRICKLE1Q96MT3 831 aaPredicted RBP17.32■□□□□ 0.36
PDE1C-201ENST00000321453 CCDC28BQ9BUN5 200 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 IKBKGQ9Y6K9 419 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 TOP3BO95985 862 aaKnown RBP17.32■□□□□ 0.36
PDE1C-201ENST00000321453 CCDC166P0CW27 439 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 PHBP35232 272 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 ETV4P43268 484 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 CCNIQ14094 377 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 HNRNPDQ14103 355 aaKnown RBP17.32■□□□□ 0.36
PDE1C-201ENST00000321453 ANKRD20A4Q4UJ75 823 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 OTOP1Q7RTM1 612 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 ZFP28Q8NHY6 868 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 NT5C1BQ96P26 610 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 CATSPER2Q96P56 530 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 C20orf27Q9GZN8 174 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 LZTS1Q9Y250 596 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 AK5Q9Y6K8 562 aa17.32■□□□□ 0.36
PDE1C-201ENST00000321453 TLR3O15455 904 aaKnown RBP17.31■□□□□ 0.36
PDE1C-201ENST00000321453 TRPA1O75762 1119 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 TBL3Q12788 808 aaKnown RBP17.31■□□□□ 0.36
PDE1C-201ENST00000321453 MPP3Q13368 585 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 MYLK3Q32MK0 819 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 DNAL1Q4LDG9 190 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 KLC3Q6P597 504 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 LRRC8BQ6P9F7 803 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 IGDCC3Q8IVU1 814 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 CTAGE3PQ8IX95 158 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 KIFC3Q9BVG8 833 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 STRIP2Q9ULQ0 834 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 IRS2Q9Y4H2 1338 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 IGKV6D-41A0A0C4DH26 115 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 TBX3O15119 743 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 ATP9BO43861 1147 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 STIP1P31948 543 aaKnown RBP17.31■□□□□ 0.36
PDE1C-201ENST00000321453 GTF2H1P32780 548 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 RPL7AP62424 266 aaKnown RBP17.31■□□□□ 0.36
PDE1C-201ENST00000321453 GRM2Q14416 872 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 TMC7Q7Z402 723 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 ICA1LQ8NDH6 482 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.31■□□□□ 0.36
PDE1C-201ENST00000321453 APOPT1Q96IL0 206 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 MMP19Q99542 508 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 APOL6Q9BWW8 343 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 GPRC5CQ9NQ84 441 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 UBAP1Q9NZ09 502 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 INPP5FQ9Y2H2 1132 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 GMEB1Q9Y692 573 aa17.31■□□□□ 0.36
PDE1C-201ENST00000321453 LOC100653049A0A140TA62 436 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 GAS7O60861 476 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 FKBP6O75344 327 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 KRT34O76011 436 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 PROCP04070 461 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 DSG3P32926 999 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 SREBF1P36956 1147 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 AP3B2Q13367 1082 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 BMPR2Q13873 1038 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 KBTBD12Q3ZCT8 623 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 HPS6Q86YV9 775 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 OGFOD1Q8N543 542 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 SRPK1Q96SB4 655 aaKnown RBP17.3■□□□□ 0.36
PDE1C-201ENST00000321453 LXNQ9BS40 222 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 FOXP3Q9BZS1 431 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 ACSS3Q9H6R3 686 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 RAB20Q9NX57 234 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 TMOD2Q9NZR1 351 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 A0A1B0GTW7 788 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 COPEO14579 308 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 SLC16A4O15374 487 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 SLC26A4O43511 780 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 TGDSO95455 350 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 UNGP13051 313 aaPredicted RBP17.3■□□□□ 0.36
PDE1C-201ENST00000321453 ATXN3P54252 364 aaPredicted RBP17.3■□□□□ 0.36
PDE1C-201ENST00000321453 NCKAP1LP55160 1127 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 YWHAGP61981 247 aaKnown RBP eCLIP17.3■□□□□ 0.36
PDE1C-201ENST00000321453 TMEM259Q4ZIN3 620 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 RSPH3Q86UC2 560 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 CNKSR2Q8WXI2 1034 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 PRPF18Q99633 342 aaKnown RBP17.3■□□□□ 0.36
PDE1C-201ENST00000321453 GPAMQ9HCL2 828 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 SERPINB13Q9UIV8 391 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 IVNS1ABPQ9Y6Y0 642 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 TMEM63AO94886 807 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 CFBP00751 764 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 INHBAP08476 426 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 CYLC2Q14093 348 aaPredicted RBP17.3■□□□□ 0.36
PDE1C-201ENST00000321453 SLFN13Q68D06 897 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 TSHZ1Q6ZSZ6 1077 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 KATNAL2Q8IYT4 538 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 GAB3Q8WWW8 586 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 CCDC106Q9BWC9 280 aa17.3■□□□□ 0.36
PDE1C-201ENST00000321453 MYPNQ86TC9 1320 aa17.29■□□□□ 0.36
PDE1C-201ENST00000321453 SHMT1P34896 483 aa17.29■□□□□ 0.36
PDE1C-201ENST00000321453 BASP1P80723 227 aaKnown RBP17.29■□□□□ 0.36
PDE1C-201ENST00000321453 KLHL38Q2WGJ6 581 aa17.29■□□□□ 0.36
PDE1C-201ENST00000321453 SLC9A9Q8IVB4 645 aa17.29■□□□□ 0.36
PDE1C-201ENST00000321453 CPT1BQ92523 772 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms