RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 GNL1P36915 607 aaPredicted RBP11.33□□□□□ -0.6
CASP3-201ENST00000308394 UPP1Q16831 310 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 PAN2Q504Q3 1202 aaKnown RBP11.33□□□□□ -0.6
CASP3-201ENST00000308394 FAM117BQ6P1L5 589 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 DSTYKQ6XUX3 929 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 DAAM2Q86T65 1068 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 RHOT2Q8IXI1 618 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 MCOLN2Q8IZK6 566 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 TMEM35BQ8NCS4 154 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 TPCN2Q8NHX9 752 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 EPAS1Q99814 870 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 C11orf70Q9BRQ4 267 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 GOLPH3Q9H4A6 298 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 ADAM22Q9P0K1 906 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 CNOT8Q9UFF9 292 aaKnown RBP11.33□□□□□ -0.6
CASP3-201ENST00000308394 LRFN2Q9ULH4 789 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 L1RE1Q9UN81 338 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 PCDHGC5Q9Y5F6 944 aa11.33□□□□□ -0.6
CASP3-201ENST00000308394 TLDC2A0PJX2 215 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 HCRTO43612 131 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 CLTBP09497 229 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 LMO2P25791 158 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 RNASELQ05823 741 aaKnown RBP11.32□□□□□ -0.6
CASP3-201ENST00000308394 TUSC3Q13454 348 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 SIM2Q14190 667 aaPredicted RBP11.32□□□□□ -0.6
CASP3-201ENST00000308394 LRRC26Q2I0M4 334 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 SLC5A9Q2M3M2 681 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 CLLU1OSQ5K130 101 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 NECAB2Q7Z6G3 386 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 ADGRF2Q8IZF7 708 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 ABI1Q8IZP0 508 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 C3orf58Q8NDZ4 430 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 URGCPQ8TCY9 931 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 HASPINQ8TF76 798 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 RMDN2Q96LZ7 410 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 SH3GL3Q99963 347 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 PRDM5Q9NQX1 630 aaPredicted RBP11.32□□□□□ -0.6
CASP3-201ENST00000308394 TMEM161AQ9NX61 479 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 PCDHGC3Q9UN70 934 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 COG5Q9UP83 839 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 PDCD11Q14690 1871 aaKnown RBP11.32□□□□□ -0.6
CASP3-201ENST00000308394 NCANO14594 1321 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 NCK2O43639 380 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 LSM8O95777 96 aaKnown RBP11.32□□□□□ -0.6
CASP3-201ENST00000308394 DNA2P51530 1060 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 TCTN1Q2MV58 587 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 NOMO2Q5JPE7 1267 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 SMYD5Q6GMV2 418 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 DENND1BQ6P3S1 775 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 MMS22LQ6ZRQ5 1243 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 UNC93AQ86WB7 457 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 PDCL2Q8N4E4 241 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 KBTBD7Q8WVZ9 684 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 SLC39A3Q9BRY0 314 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 NUP85Q9BW27 656 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 DPEP3Q9H4B8 488 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 TMEM165Q9HC07 324 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 FAM49BQ9NUQ9 324 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 UBAP1Q9NZ09 502 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 GTF3C4Q9UKN8 822 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 SAR1BQ9Y6B6 198 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 M0QYV0 167 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 MICAL2O94851 1124 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 LIN9Q5TKA1 542 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 WSCD1Q658N2 575 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 MON1BQ7L1V2 547 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 TOP6BLQ8N6T0 577 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 UBA3Q8TBC4 463 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 FAM193BQ96PV7 902 aaPredicted RBP11.32□□□□□ -0.6
CASP3-201ENST00000308394 PSMB7Q99436 277 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 TRIM7Q9C029 511 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 ZNF518BQ9C0D4 1074 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 TBX21Q9UL17 535 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 KIAA1257Q9ULG3 409 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 PACSIN2Q9UNF0 486 aaPredicted RBP11.32□□□□□ -0.6
CASP3-201ENST00000308394 NME7Q9Y5B8 376 aa11.32□□□□□ -0.6
CASP3-201ENST00000308394 TIMM13Q9Y5L4 95 aaPredicted RBP11.32□□□□□ -0.6
CASP3-201ENST00000308394 I3L4J1 428 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 BUB1BO60566 1050 aaPredicted RBP11.31□□□□□ -0.6
CASP3-201ENST00000308394 SRGAP2O75044 1071 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 CYP1A2P05177 515 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 MYBL1P10243 752 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 CNGA2Q16280 664 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 PPP1R26Q5T8A7 1209 aaPredicted RBP11.31□□□□□ -0.6
CASP3-201ENST00000308394 SDE2Q6IQ49 451 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 PPP1R2P3Q6NXS1 205 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 LLGL2Q6P1M3 1020 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 ERICH1Q86X53 443 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 ZNF280BQ86YH2 543 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 SYCE1Q8N0S2 351 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 WDTC1Q8N5D0 677 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 SVIPQ8NHG7 77 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 ZNF564Q8TBZ8 553 aaPredicted RBP11.31□□□□□ -0.6
CASP3-201ENST00000308394 GOLGA1Q92805 767 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 LPIN3Q9BQK8 851 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 DNAI2Q9GZS0 605 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 PIF1Q9H611 641 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 L2HGDHQ9H9P8 463 aa11.31□□□□□ -0.6
CASP3-201ENST00000308394 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms