RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 CDH24Q86UP0 819 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 SEPT12Q8IYM1 358 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 AHI1Q8N157 1196 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 FEZF2Q8TBJ5 459 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 C7orf25Q9BPX7 421 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 KRT84Q9NSB2 600 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 MCM8Q9UJA3 840 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 H3BQF6 201 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 PCNAP12004 261 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 EXOSC10Q01780 885 aaKnown RBP17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 ZSCAN18Q8TBC5 510 aaPredicted RBP17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 IGDCC4Q8TDY8 1250 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 REXO4Q9GZR2 422 aaKnown RBP17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 ATP6V1HQ9UI12 483 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 KCNQ2O43526 872 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 CD44P16070 742 aaKnown RBP17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 PAN2Q504Q3 1202 aaKnown RBP17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 DGKKQ5KSL6 1271 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 ARMCX6Q7L4S7 300 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 B3GALNT2Q8NCR0 500 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 SPRTNQ9H040 489 aaPredicted RBP17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 PSD3Q9NYI0 1048 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 AXIN2Q9Y2T1 843 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 PIPSLA2A3N6 862 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 COG2Q14746 738 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 C16orf72Q14CZ0 275 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 KLHDC7AQ5VTJ3 777 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 SIX5Q8N196 739 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 CALML6Q8TD86 181 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 ZFYVE1Q9HBF4 777 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 GPRC5DQ9NZD1 345 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 N6AMT1Q9Y5N5 214 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 ROBO2Q9HCK4 1378 aa17.42■□□□□ 0.38
TSPAN3-201ENST00000267970 TRIM43BA6NCK2 446 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 ST8SIA6P61647 398 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 EFCAB12Q6NXP0 572 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 MYCBPAPQ8TBZ2 947 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 SHANK2Q9UPX8 1470 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 UBOX5O94941 541 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 RPL10AP62906 217 aaKnown RBP17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 MRPS35P82673 323 aaKnown RBP17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 SGSM1Q2NKQ1 1148 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 NARS2Q96I59 477 aaKnown RBP17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 NOL6Q9H6R4 1146 aaKnown RBP17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 PIM2Q9P1W9 311 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 CDY2AQ9Y6F7 541 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 CDY1Q9Y6F8 540 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 MED15Q96RN5 788 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 KLHL31Q9H511 634 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 RPS6KL1Q9Y6S9 549 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 USP6P35125 1406 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 FAM25AB3EWG3 89 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 FAM25CB3EWG5 89 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 FAM25GB3EWG6 89 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 PPP1R3GB7ZBB8 358 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 M0QYT0 321 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 PSMD14O00487 310 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 RHOBTB3O94955 611 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 OTUD3Q5T2D3 398 aaPredicted RBP17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 TRPC4APQ8TEL6 797 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 ANKS1AQ92625 1134 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 NACC2Q96BF6 587 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 HDHD2Q9H0R4 259 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 SEMA6AQ9H2E6 1030 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 C1orf232A0A0U1RR37 186 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 TMEM191CA6NGB0 347 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 RXRBP28702 533 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 EPHB2P29323 1055 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 NFYCQ13952 458 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 ATF7IP2Q5U623 682 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 C12orf60Q5U649 245 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 TMEM79Q9BSE2 394 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 IL25Q9H293 177 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 POLG2Q9UHN1 485 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 DAPK2Q9UIK4 370 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 CAPN6Q9Y6Q1 641 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 KATNA1O75449 491 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 ARHGEF6Q15052 776 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 NEDD8Q15843 81 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 FHDC1Q9C0D6 1143 aaPredicted RBP17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 C6orf62Q9GZU0 229 aaPredicted RBP17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 CRLS1Q9UJA2 301 aa17.41■□□□□ 0.38
TSPAN3-201ENST00000267970 COL15A1P39059 1388 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 TYW3Q6IPR3 259 aaKnown RBP17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 KRT77Q7Z794 578 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 PPP1R14AQ96A00 147 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 DEPDC7Q96QD5 511 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 OSGEPQ9NPF4 335 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 ATP10AO60312 1499 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 SYNMO15061 1565 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 HEATR9A2RTY3 570 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 BAIAP3O94812 1187 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 PSMB9P28065 219 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 RDM1Q8NG50 284 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 SH3TC2Q8TF17 1288 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 TARS2Q9BW92 718 aaKnown RBP17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 RNF181Q9P0P0 153 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 SNX8Q9Y5X2 465 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 FAM86B2P0C5J1 330 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 C6orf222P0C671 652 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms