RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 WWOXQ9NZC7 414 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 UNC13BO14795 1591 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 LOC100653049A0A140TA62 436 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 KRT34O76011 436 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 RARBP10826 455 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 EPB42P16452 691 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PRIM2P49643 509 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 ADSSL1Q8N142 457 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 SPATA16Q9BXB7 569 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 RERGLQ9H628 205 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 CD248Q9HCU0 757 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 DIABLOQ9NR28 239 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 KCND2Q9NZV8 630 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 CORO7P57737 925 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 CHMP1BQ7LBR1 199 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PIM2Q9P1W9 311 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PNMA8BQ9ULN7 279 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 IRAK1P51617 712 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 LINC00523Q86TU6 105 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 SESN1Q9Y6P5 492 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 CDHR2Q9BYE9 1310 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 IGSF9BQ9UPX0 1349 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PMPCBO75439 489 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PLEKP08567 350 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 CTSHP09668 335 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 TXNP10599 105 aaKnown RBP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 ACADSP16219 412 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 ZNF23P17027 643 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PLIN5Q00G26 463 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 PRKCEQ02156 737 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 FUT11Q495W5 492 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 ZNF772Q68DY9 489 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 KCNB2Q92953 911 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 MTA3Q9BTC8 594 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 MRPS26Q9BYN8 205 aaKnown RBP9.47□□□□□ -0.89
CSMD1-218ENST00000635120 KRT84Q9NSB2 600 aa9.47□□□□□ -0.89
CSMD1-218ENST00000635120 NPM3O75607 178 aaKnown RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 HLA-DRAP01903 254 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 KLHL25Q9H0H3 589 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 CACNA2D2Q9NY47 1150 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 HERC5Q9UII4 1024 aaKnown RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 STRNO43815 780 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 ZC2HC1CQ53FD0 456 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 CACHD1Q5VU97 1274 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 RIBC1Q8N443 379 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 VPS37AQ8NEZ2 397 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 ANKRD49Q8WVL7 239 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 CELF1Q92879 486 aaKnown RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 SGF29Q96ES7 293 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 HIC2Q96JB3 615 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 THUMPD3Q9BV44 507 aaKnown RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 SLC30A1Q9Y6M5 507 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 MED14O60244 1454 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 BAZ2AQ9UIF9 1905 aaKnown RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 CHI3L1P36222 383 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 P3H2Q8IVL5 708 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 ARID3BQ8IVW6 561 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 USP38Q8NB14 1042 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 CINPQ9BW66 212 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 ROPN1BQ9BZX4 212 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 ROPN1Q9HAT0 212 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 NARFQ9UHQ1 456 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 RNF112Q9ULX5 631 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 TMA7Q9Y2S6 64 aaKnown RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 CST8O60676 142 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 H2AFYO75367 372 aaKnown RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 SLC29A2Q14542 456 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 ILKAPQ9H0C8 392 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 ALKQ9UM73 1620 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 OVGP1Q12889 678 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 FAM83EQ2M2I3 478 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 HPDLQ96IR7 371 aa9.46□□□□□ -0.89
CSMD1-218ENST00000635120 METTL5Q9NRN9 209 aaKnown RBP9.46□□□□□ -0.89
CSMD1-218ENST00000635120 DNAJC13O75165 2243 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 ST8SIA6P61647 398 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 KCNV1Q6PIU1 500 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 EFL1Q7Z2Z2 1120 aaKnown RBP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 ACSF2Q96CM8 615 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 SH3GL1Q99961 368 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 ALDH8A1Q9H2A2 487 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 TFR2Q9UP52 801 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 NR5A2O00482 541 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 PSTPIP1O43586 416 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 CENPCQ03188 943 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 TRIM71Q2Q1W2 868 aaKnown RBP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 ASZ1Q8WWH4 475 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 SMARCAD1Q9H4L7 1026 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 TMEM8AQ9HCN3 771 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 FAM153AQ9UHL3 310 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 SMNDC1O75940 238 aaKnown RBP eCLIP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 PSMC3P17980 439 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 NCF4Q15080 339 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 KRT78Q8N1N4 520 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 BHMTQ93088 406 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 VPS9D1Q9Y2B5 631 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 SKAP2O75563 359 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-218ENST00000635120 GPD1P21695 349 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 RXRBP28702 533 aa9.46□□□□□ -0.9
CSMD1-218ENST00000635120 COG2Q14746 738 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms