RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 CD19P15391 556 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 MARK3P27448 753 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 RAP1GAPP47736 663 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 GMPSP49915 693 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 STAT5BP51692 787 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 CLNS1AP54105 237 aaKnown RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 NRLP54845 237 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 LACTBP83111 547 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 CCDC15Q0P6D6 951 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 THNSL1Q8IYQ7 743 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 EMC1Q8N766 993 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 UTP4Q969X6 686 aaKnown RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 KLF6Q99612 283 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 NRBP2Q9NSY0 501 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 PPP1R1BQ9UD71 204 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 C15orf41Q9Y2V0 281 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 SH3BP1Q9Y3L3 701 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 USH1CQ9Y6N9 552 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 ARID2Q68CP9 1835 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 A0A1B0GUA9 196 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 MSCO60682 206 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 TOM1L1O75674 476 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 UBA1P22314 1058 aaKnown RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 EIF4BP23588 611 aaKnown RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 CCND1P24385 295 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 YARSP54577 528 aaKnown RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 ATP11AP98196 1134 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 PRKG1Q13976 671 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 ZNF699Q32M78 642 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 PTPN20Q4JDL3 420 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 SYCP2LQ5T4T6 812 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 DCAF15Q66K64 600 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 ZNF449Q6P9G9 518 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 LRRC71Q8N4P6 559 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 RSAD2Q8WXG1 361 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 CPT1BQ92523 772 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 ZNF75CPQ92670 426 aaPredicted RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 TXLNGQ9NUQ3 528 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 NOP53Q9NZM5 478 aaKnown RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 SENP1Q9P0U3 644 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 CYTH4Q9UIA0 394 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 POLIQ9UNA4 740 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 SPDYE16A6NNV3 312 aaPredicted RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 LRCH4O75427 683 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 KRT19P08727 400 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 PTPN7P35236 360 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 RPL22P35268 128 aaKnown RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 CDH8P55286 799 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 TAF5Q15542 800 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 TARBP2Q15633 366 aaKnown RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 ZPBP2Q6X784 338 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 UNC45BQ8IWX7 931 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 PPIL6Q8IXY8 311 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 RNF149Q8NC42 400 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 ACO2Q99798 780 aaKnown RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 MRPL4Q9BYD3 311 aaKnown RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 ZNF518BQ9C0D4 1074 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 ALG13Q9NP73 1137 aaKnown RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 HOXC10Q9NYD6 342 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 SLC24A2Q9UI40 661 aa12.39□□□□□ -0.43
C11orf54-215ENST00000617482 MYH9P35579 1960 aaKnown RBP12.39□□□□□ -0.43
C11orf54-215ENST00000617482 IGKV6D-21A0A0A0MT36 114 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 FARP2O94887 1054 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 CBX6O95503 412 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 GJB1P08034 283 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 ADRA1DP25100 572 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 TCF7P36402 384 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 RFC5P40937 340 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 SKIV2L2P42285 1042 aaKnown RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 ASPAP45381 313 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 AP3M2P53677 418 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 ARL4CP56559 192 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 PSMC1P62191 440 aaKnown RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 SLC25A11Q02978 314 aaKnown RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 TAP1Q03518 808 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 SEPT7Q16181 437 aaKnown RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 MAPK6Q16659 721 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 BBS9Q3SYG4 887 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 OTOAQ7RTW8 1153 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 PALM2Q8IXS6 379 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 NIPA2Q8N8Q9 360 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 FAM71DQ8N9W8 422 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 FBXO36Q8NEA4 188 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 RSRC1Q96IZ7 334 aaKnown RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 WDR83Q9BRX9 315 aaKnown RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 NPHS2Q9NP85 383 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 AFG3L2Q9Y4W6 797 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 SNCAIPQ9Y6H5 919 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 OGTO15294 1046 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 KDELR1P24390 212 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 ALDH3A1P30838 453 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 ICAM3P32942 547 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 SLC18A1P54219 525 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 LAMTOR4Q0VGL1 99 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 OVGP1Q12889 678 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 NAA25Q14CX7 972 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 LY6KQ17RY6 165 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 EFHC2Q5JST6 749 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms