RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 TRIM49D1C9J1S8 452 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 PNPLA4P41247 253 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 L3MBTL3Q96JM7 780 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 GLT1D1Q96MS3 346 aa13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.04□□□□□ -0.32
TNFAIP3-206ENST00000612899 RIMS1Q86UR5 1692 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 AP3B1O00203 1094 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 PSTPIP1O43586 416 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 FAM107AO95990 144 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 GLI1P08151 1106 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 RAP1GAPP47736 663 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 CPT1AP50416 773 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 HIC1Q14526 733 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZNF484Q5JVG2 852 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 THEMIS2Q5TEJ8 643 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 GRAMD4Q6IC98 578 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 METTL7BQ6UX53 244 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 TTC30AQ86WT1 665 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 CHSY1Q86X52 802 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 EPS8L3Q8TE67 593 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 CPB2Q96IY4 423 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 ING2Q9H160 280 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 ADARB2Q9NS39 739 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 TPD52L2O43399 206 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 DDNO94850 711 aaPredicted RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 CXCL8P10145 99 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 VDRP11473 427 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 RHBDL3P58872 404 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 TMEM119Q4V9L6 283 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 C9orf131Q5VYM1 1079 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 LRRC6Q86X45 466 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 DCP1BQ8IZD4 617 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 KIF2BQ8N4N8 673 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 KRT35Q92764 455 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 ELMO2Q96JJ3 720 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 SPATA17Q96L03 361 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 MROH8Q9H579 483 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 PPCSQ9HAB8 311 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 VWDEQ8N2E2 1590 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 ARHGEF28Q8N1W1 1705 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 SMAPO00193 183 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 VWA5AO00534 786 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 PMPCBO75439 489 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 AP1G2O75843 785 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 OTUD4Q01804 1114 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 LY6KQ17RY6 165 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 SWT1Q5T5J6 900 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 MEI1Q5TIA1 1274 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 SAMD3Q8N6K7 520 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 GLIS3Q8NEA6 775 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 CENPKQ9BS16 269 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZSCAN5CA6NGD5 496 aaPredicted RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 KBTBD13C9JR72 458 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 H3BRB1 525 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 NDUFS3O75489 264 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 ZNF189O75820 626 aaPredicted RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 CYP2C8P10632 490 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 PYGBP11216 843 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 ETFBP38117 255 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 THPOP40225 353 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 TWF1Q12792 350 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 PDAP1Q13442 181 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 MYBPC2Q14324 1141 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 PTGISQ16647 500 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 ACTRT1Q8TDG2 376 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 GFM2Q969S9 779 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 TUT1Q9H6E5 874 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 MRPL40Q9NQ50 206 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 LATS2Q9NRM7 1088 aa13.03□□□□□ -0.32
TNFAIP3-206ENST00000612899 PRRG1O14668 218 aa13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 VIL1P09327 827 aaKnown RBP13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 DSG3P32926 999 aa13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 EVX2Q03828 476 aa13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 TFDP3Q5H9I0 405 aa13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 LRRC8EQ6NSJ5 796 aa13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 FAM131BQ86XD5 332 aa13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 KLHL23Q8NBE8 558 aa13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 IL17RAQ96F46 866 aa13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 STAMBPL1Q96FJ0 436 aa13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 SLC30A1Q9Y6M5 507 aa13.02□□□□□ -0.32
TNFAIP3-206ENST00000612899 LOC100653049A0A140TA62 436 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 C17orf102A2RUQ5 167 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 KRT34O76011 436 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 PROSCO94903 275 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 ENO3P13929 434 aaPredicted RBP13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 AARSP49588 968 aaKnown RBP eCLIP13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 ARHGDIAP52565 204 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 NRBF2Q96F24 287 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 TMEM121Q9BTD3 319 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 CATSPERBQ9H7T0 1116 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 ITGB1BP2Q9UKP3 347 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 SLC39A10Q9ULF5 831 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 FZD1Q9UP38 647 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 TMEM247A6NEH6 219 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 TGFB2P61812 414 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 CNTN2Q02246 1040 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 LAMTOR4Q0VGL1 99 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 RBBP7Q16576 425 aa13.02□□□□□ -0.33
TNFAIP3-206ENST00000612899 ANO5Q75V66 913 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms