RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 KRT35Q92764 455 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 TSNARE1Q96NA8 513 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 POP1Q99575 1024 aaKnown RBP10.91□□□□□ -0.66
LIG1-220ENST00000601091 FOXP3Q9BZS1 431 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 ECT2Q9H8V3 914 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 PFDN2Q9UHV9 154 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 GGA2Q9UJY4 613 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 WDR91A4D1P6 747 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 FAM25EA8MYX2 175 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 TMCC2O75069 709 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 FSBPO95073 299 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 HLA-DRAP01903 254 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 SCTRP47872 440 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 ARSEP51690 589 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 PPP3CAQ08209 521 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 SV2AQ7L0J3 742 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 SH3BP5LQ7L8J4 393 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 PCGF5Q86SE9 256 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 SLC15A3Q8IY34 581 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 RCOR2Q8IZ40 523 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 ARL6IP6Q8N6S5 226 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 GOLM1Q8NBJ4 401 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 TMC2Q8TDI7 906 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 LRRC37BQ96QE4 947 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 PPP1R12CQ9BZL4 782 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 ZWILCHQ9H900 591 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 WHRNQ9P202 907 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 PCDHAC2Q9Y5I4 1007 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 NCANO14594 1321 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 PI4K2BG5E9Z4 385 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 NFIBO00712 420 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 ATP9BO43861 1147 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 RALAP11233 206 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
LIG1-220ENST00000601091 MTTPP55157 894 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 CENPCQ03188 943 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 TBL3Q12788 808 aaKnown RBP10.91□□□□□ -0.66
LIG1-220ENST00000601091 TFDP1Q14186 410 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 SCARA5Q6ZMJ2 495 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 RDM1Q8NG50 284 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 CEP44Q9C0F1 390 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 IKZF4Q9H2S9 585 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 ZNF302Q9NR11 478 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 KIAA1257Q9ULG3 409 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 PCDHA3Q9Y5H8 950 aa10.91□□□□□ -0.66
LIG1-220ENST00000601091 IGSF9BQ9UPX0 1349 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 TIAM2Q8IVF5 1701 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 DNM1LO00429 736 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 GTF2H1P32780 548 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 TMED10P49755 219 aaKnown RBP10.9□□□□□ -0.66
LIG1-220ENST00000601091 OSTNP61366 133 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 CASC4Q6P4E1 433 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 DGLUCYQ7Z3D6 616 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 ZBED8Q8IZ13 594 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 ACMSDQ8TDX5 336 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 NLRP7Q8WX94 980 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 ATG4AQ8WYN0 398 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 SGCDQ92629 289 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 MBOAT7Q96N66 472 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 RILPQ96NA2 401 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 ADAM33Q9BZ11 813 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 CDC42EP4Q9H3Q1 356 aaKnown RBP10.9□□□□□ -0.66
LIG1-220ENST00000601091 ETNK1Q9HBU6 452 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 VCX3AQ9NNX9 186 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 SENP1Q9P0U3 644 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 GINS2Q9Y248 185 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 EPN2O95208 641 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 RARAP10276 462 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 DLG4P78352 724 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 PDIA2Q13087 525 aaKnown RBP10.9□□□□□ -0.66
LIG1-220ENST00000601091 ACCSLQ4AC99 568 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 WDR45BQ5MNZ6 344 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 DUPD1Q68J44 220 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 XRRA1Q6P2D8 792 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 DARS2Q6PI48 645 aaKnown RBP10.9□□□□□ -0.66
LIG1-220ENST00000601091 THNSL1Q8IYQ7 743 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 OSCP1Q8WVF1 389 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 OSBPL1AQ9BXW6 950 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 AGO4Q9HCK5 861 aaKnown RBP10.9□□□□□ -0.66
LIG1-220ENST00000601091 ATXN10Q9UBB4 475 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 STRIP2Q9ULQ0 834 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 NEU2Q9Y3R4 380 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 MYH13Q9UKX3 1938 aa10.9□□□□□ -0.66
LIG1-220ENST00000601091 RIPK2O43353 540 aa10.9□□□□□ -0.67
LIG1-220ENST00000601091 IFI35P80217 286 aaPredicted RBP10.9□□□□□ -0.67
LIG1-220ENST00000601091 MTMR2Q13614 643 aa10.9□□□□□ -0.67
LIG1-220ENST00000601091 ITIH4Q14624 930 aa10.9□□□□□ -0.67
LIG1-220ENST00000601091 MAPK6Q16659 721 aa10.9□□□□□ -0.67
LIG1-220ENST00000601091 TMEM151BQ8IW70 566 aa10.9□□□□□ -0.67
LIG1-220ENST00000601091 RBBP8NLQ8NC74 664 aaPredicted RBP10.9□□□□□ -0.67
LIG1-220ENST00000601091 EPS8L1Q8TE68 723 aa10.9□□□□□ -0.67
LIG1-220ENST00000601091 FAM118BQ9BPY3 351 aa10.9□□□□□ -0.67
LIG1-220ENST00000601091 DNAJC5Q9H3Z4 198 aa10.9□□□□□ -0.67
LIG1-220ENST00000601091 ZNRF3Q9ULT6 936 aa10.9□□□□□ -0.67
LIG1-220ENST00000601091 TMEM221A6NGB7 291 aa10.89□□□□□ -0.67
LIG1-220ENST00000601091 TISP43B9A030 160 aa10.89□□□□□ -0.67
LIG1-220ENST00000601091 ZW10O43264 779 aa10.89□□□□□ -0.67
LIG1-220ENST00000601091 EXTL3O43909 919 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms