RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 DNM3Q9UQ16 869 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 ADGRG1Q9Y653 693 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 AKAP13Q12802 2813 aa9.42□□□□□ -0.9
SMAD4-215ENST00000592911 CABIN1Q9Y6J0 2220 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 GIPC1O14908 333 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 CTDNEP1O95476 244 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 FDPSP14324 419 aaKnown RBP9.41□□□□□ -0.9
SMAD4-215ENST00000592911 CDC25AP30304 524 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 GBP1P32455 592 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 CCT6AP40227 531 aaKnown RBP9.41□□□□□ -0.9
SMAD4-215ENST00000592911 PXNP49023 591 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-215ENST00000592911 GALK1P51570 392 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 NLRP12P59046 1061 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 OSTNP61366 133 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 SEMA3BQ13214 749 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 SLC14A1Q13336 389 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 SPATA1Q5VX52 437 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 LPCAT2Q7L5N7 544 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 METTL23Q86XA0 190 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 NT5DC4Q86YG4 428 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 DCP1BQ8IZD4 617 aaKnown RBP9.41□□□□□ -0.9
SMAD4-215ENST00000592911 DAW1Q8N136 415 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 IGSF22Q8N9C0 903 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 ATAD1Q8NBU5 361 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 RPLP0P6Q8NHW5 317 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 USP13Q92995 863 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-215ENST00000592911 TATDN2Q93075 761 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 MYRFLQ96LU7 910 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 FOXP1Q9H334 677 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-215ENST00000592911 EBF3Q9H4W6 596 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 TUBGCP4Q9UGJ1 667 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 RALYQ9UKM9 306 aaKnown RBP9.41□□□□□ -0.9
SMAD4-215ENST00000592911 MMP17Q9ULZ9 603 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 C2CD2Q9Y426 696 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 GOLGA4Q13439 2230 aaKnown RBP9.41□□□□□ -0.9
SMAD4-215ENST00000592911 IGSF10Q6WRI0 2623 aa9.41□□□□□ -0.9
SMAD4-215ENST00000592911 SMAPO00193 183 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 PIRO00625 290 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 MEFVO15553 781 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-215ENST00000592911 SLC26A4O43511 780 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 HIP1RO75146 1068 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 NFATC1O95644 943 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 PIGRP01833 764 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 F11P03951 625 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 CAPNS1P04632 268 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 CXCL8P10145 99 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.9
SMAD4-215ENST00000592911 HAPLN1P10915 354 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-215ENST00000592911 PLS3P13797 630 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 ATF6P18850 670 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 MCM7P33993 719 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 USP4Q13107 963 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 MTF1Q14872 753 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 MGAT5BQ3V5L5 792 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 PREPLQ4J6C6 727 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-215ENST00000592911 NUDT18Q6ZVK8 323 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 C1orf186Q6ZWK4 172 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 FSIP1Q8NA03 581 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 TMEM161BQ8NDZ6 487 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 USP33Q8TEY7 942 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 WHAMMQ8TF30 809 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 GTF3C6Q969F1 213 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 SENP8Q96LD8 212 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 SEPT5Q99719 369 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-215ENST00000592911 SMOC1Q9H4F8 434 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 ASB7Q9H672 318 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 GJB4Q9NTQ9 266 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 DDX19AQ9NUU7 478 aaKnown RBP9.4□□□□□ -0.9
SMAD4-215ENST00000592911 LARSQ9P2J5 1176 aaKnown RBP9.4□□□□□ -0.9
SMAD4-215ENST00000592911 DKK4Q9UBT3 224 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 LRWD1Q9UFC0 647 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 USP20Q9Y2K6 914 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 SLC27A5Q9Y2P5 690 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 PCDH15Q96QU1 1955 aa9.4□□□□□ -0.9
SMAD4-215ENST00000592911 GCN1Q92616 2671 aaKnown RBP9.4□□□□□ -0.9
SMAD4-215ENST00000592911 LOC400499M0QZD8 3231 aa9.4□□□□□ -0.91
SMAD4-215ENST00000592911 ASH1LQ9NR48 2969 aaKnown RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 NBEAQ8NFP9 2946 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 A0A087WWV3 80 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 A0A0A0MRY4 1105 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 ANO9A1A5B4 782 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 OTOL1A6NHN0 477 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 OGTO15294 1046 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 EIF5BO60841 1220 aaKnown RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 NOL4O94818 638 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 OR4Q2P0C623 313 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 USP17L7P0C7H9 530 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 HMGA1P17096 107 aaKnown RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 PRPHP41219 470 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 P2RY2P41231 377 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 PNPLA4P41247 253 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 PPP3CCP48454 512 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 IFNAR2P48551 515 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 RPL10AP62906 217 aaKnown RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 IRX4P78413 519 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 CYP4F8P98187 520 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 MAPK7Q13164 816 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 ZNF77Q15935 545 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 CRY1Q16526 586 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms