RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	WDHD1	O75717	1129 aa	Predicted RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	PDE8B	O95263	885 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	MYB	P10242	640 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ECHS1	P30084	290 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	CCND3	P30281	292 aa	Predicted RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	KIR2DL3	P43628	341 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	PER3	P56645	1201 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	CCL14	Q16627	93 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	SHROOM1	Q2M3G4	852 aa	Predicted RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	C19orf54	Q5BKX5	351 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	C9orf50	Q5SZB4	431 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	GJC2	Q5T442	439 aa	Predicted RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	XP32	Q5T750	250 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	TCERG1L	Q5VWI1	586 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	FAM109B	Q6ICB4	259 aa	Predicted RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	USP30	Q70CQ3	517 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	RALYL	Q86SE5	291 aa	Known RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ZNF761	Q86XN6	746 aa	Predicted RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	RHOT1	Q8IXI2	618 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	SCYL3	Q8IZE3	742 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	MSL3	Q8N5Y2	521 aa	Known RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	USP38	Q8NB14	1042 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ZNF384	Q8TF68	577 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	KAT5	Q92993	513 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	LPP	Q93052	612 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	C1GALT1C1	Q96EU7	318 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ACO2	Q99798	780 aa	Known RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	TXNRD2	Q9NNW7	524 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	C1orf112	Q9NSG2	853 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	USP40	Q9NVE5	1235 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ING3	Q9NXR8	418 aa		7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	FRMPD2	Q68DX3	1309 aa	Predicted RBP	7.01	□□□□□ -1.29
HERPUD1-208	ENST00000563911	RFX7	Q2KHR2	1363 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	MROH6	A6NGR9	719 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ENDOD1	O94919	500 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	RPLP2	P05387	115 aa	Known RBP	7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	CYP2B6	P20813	491 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	RFX5	P48382	616 aa	Predicted RBP	7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ATP2C1	P98194	919 aa	Predicted RBP	7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	EXOSC9	Q06265	439 aa	Known RBP	7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	GRM3	Q14832	879 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	SEPT2	Q15019	361 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ZNF124	Q15973	351 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	RABL6	Q3YEC7	729 aa	Predicted RBP	7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ZNF568	Q3ZCX4	644 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	KRT40	Q6A162	431 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	PPP4R3A	Q6IN85	833 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	CCSAP	Q6IQ19	270 aa	Predicted RBP	7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	FAM124A	Q86V42	546 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	CCAR1	Q8IX12	1150 aa	Known RBP	7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	TP53I13	Q8NBR0	393 aa	Predicted RBP	7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	OR14K1	Q8NGZ2	314 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	TBC1D22A	Q8WUA7	517 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	USP6NL	Q92738	828 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	TIFA	Q96CG3	184 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	BICC1	Q9H694	974 aa	Known RBP	7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	DDX20	Q9UHI6	824 aa	Known RBP	7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	SLC45A1	Q9Y2W3	748 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	FANCI	Q9NVI1	1328 aa		7	□□□□□ -1.29
HERPUD1-208	ENST00000563911	PTPRF	P10586	1907 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	TOX4	O94842	621 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	MAP4K4	O95819	1239 aa	Predicted RBP	6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	SLURP1	P55000	103 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	BPIFB4	P59827	614 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	GBX1	Q14549	363 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ACAP1	Q15027	740 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	SHH	Q15465	462 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	TBR1	Q16650	682 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	METTL24	Q5JXM2	366 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911		Q6ZVL8	140 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	FASTKD5	Q7L8L6	764 aa	Known RBP	6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ATG9A	Q7Z3C6	839 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	KBTBD2	Q8IY47	623 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ZBTB34	Q8NCN2	500 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ZNF480	Q8WV37	535 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	UHRF1	Q96T88	793 aa	Predicted RBP	6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	PRKRIP1	Q9H875	184 aa	Predicted RBP	6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	TMOD2	Q9NZR1	351 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	FLRT1	Q9NZU1	646 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	AGTPBP1	Q9UPW5	1226 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	CFAP20	Q9Y6A4	193 aa	Known RBP	6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	UTY	O14607	1347 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	MROH5	Q6ZUA9	1318 aa		6.99	□□□□□ -1.29
HERPUD1-208	ENST00000563911	B4GALT4	O60513	344 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	MYL1	P05976	194 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ITGB8	P26012	769 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	EPHB4	P54760	987 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	WNT3A	P56704	352 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	CALD1	Q05682	793 aa	Known RBP	6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	SPP2	Q13103	211 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	FAM110C	Q1W6H9	321 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	MST1L	Q2TV78	715 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	MAP9	Q49MG5	647 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	TTC7B	Q86TV6	843 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	DENND1C	Q8IV53	801 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	DRC7	Q8IY82	874 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ZDHHC14	Q8IZN3	488 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	PQLC1	Q8N2U9	271 aa		6.98	□□□□□ -1.29
HERPUD1-208	ENST00000563911	ANKRD53	Q8N9V6	530 aa		6.98	□□□□□ -1.29

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