RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PTPRN2Q92932 1015 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 L3MBTL3Q96JM7 780 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UGT1A7Q9HAW7 530 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UGT1A10Q9HAW8 530 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UGT1A8Q9HAW9 530 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ZSCAN32Q9NX65 697 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SPDYE2BA6NHP3 402 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CCNKO75909 580 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SPDYE6P0CI01 402 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 IL12AP29459 219 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ADD2P35612 726 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SERPINB9P50453 376 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PTPN12Q05209 780 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 C5orf22Q49AR2 442 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 USP13Q92995 863 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PHF12Q96QT6 1004 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 USP17L10C9JJH3 530 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 C21orf2O43822 256 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 HOXA7P31268 230 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PHC1P78364 1004 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 DPYSL3Q14195 570 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SLC4A11Q8NBS3 891 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ASZ1Q8WWH4 475 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 AGAP3Q96P47 875 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PCDH12Q9NPG4 1184 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SNX7Q9UNH6 387 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MZF1P28698 734 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 OR2B6P58173 313 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 FCHO2Q0JRZ9 810 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CYP51A1Q16850 503 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PDZK1Q5T2W1 519 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 GALNT18Q6P9A2 607 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UNC45BQ8IWX7 931 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ATG4AQ8WYN0 398 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PWWP2AQ96N64 755 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UBDO15205 165 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 RGS5O15539 181 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF862O60290 1169 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ASLP04424 464 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ANXA13P27216 316 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 FBXW8Q8N3Y1 598 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SIPA1Q96FS4 1042 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PPP1R10Q96QC0 940 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 BEGAINQ9BUH8 593 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UCKL1Q9NWZ5 548 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ZMYM5Q9UJ78 669 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 HAT1O14929 419 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 UQCRBP14927 111 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 FOXN2P32314 431 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 AKAP1Q92667 903 aaKnown RBP eCLIP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 RACGAP1Q9H0H5 632 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 BLOC1S6Q9UL45 172 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PDXKO00764 312 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF37AP17032 561 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TBCCQ15814 346 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 FITM2Q8N6M3 262 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 EIF1ADQ8N9N8 165 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ADCY4Q8NFM4 1077 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 DCAF5Q96JK2 942 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MXD3Q9BW11 206 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 FRMD8Q9BZ67 464 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MAF1Q9H063 256 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PSMD3O43242 534 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MED7O43513 233 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CHKAP35790 457 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ZBED5Q49AG3 693 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 C16orf46Q6P387 395 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SYNE4Q8N205 404 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CADM1Q9BY67 442 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 AIPL1Q9NZN9 384 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PI4KBQ9UBF8 816 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 C12orf60Q5U649 245 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MZT2BQ6NZ67 158 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CEP170P1Q96L14 293 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SNTNA6NMZ2 147 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SLC26A4O43511 780 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PLEKHA8P1O95397 391 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 PDGFRBP09619 1106 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF521Q96K83 1311 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TINF2Q9BSI4 451 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TPK1Q9H3S4 243 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CATSPERZQ9NTU4 200 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 FBXO40Q9UH90 709 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TTC21BQ7Z4L5 1316 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 A0A0G2JLW4 131 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 MATN2O00339 956 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 H2AFYO75367 372 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 ZSCAN5DPP0CG00 497 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 RPL14P50914 215 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 OSTNP61366 133 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CAPRIN1Q14444 709 aaKnown RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 SWSAP1Q6NVH7 229 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC81Q6ZN84 652 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 C12orf50Q8NA57 414 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-248ENST00000558190 KCNK4Q9NYG8 393 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 CENPBD1B2RD01 187 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 LDLRP01130 860 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 TRIM69Q86WT6 500 aa3.83□□□□□ -1.8
ATXN3-248ENST00000558190 OR8H1Q8NGG4 311 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms