RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 RMND5AQ9H871 391 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 DSEQ9UL01 958 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 TTLL3Q9Y4R7 772 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 GAKO14976 1311 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 CCT8L1PA6NM43 557 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 GOLGA8RI6L899 631 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 FTLP02792 175 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 EIF2S1P05198 315 aaKnown RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 SNRPAP09012 282 aaKnown RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 STIP1P31948 543 aaKnown RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 S100A5P33763 92 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 PGM1P36871 562 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 PSMC1P62191 440 aaKnown RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 KLC1Q07866 573 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 MAD2L1Q13257 205 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 CTTNQ14247 550 aaKnown RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 LRRC8EQ6NSJ5 796 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 CHRDL2Q6WN34 429 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 ILDR2Q71H61 639 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 TMC2Q8TDI7 906 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 ATXN2LQ8WWM7 1075 aaKnown RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 C1QTNF7Q9BXJ2 289 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 L2HGDHQ9H9P8 463 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 CTNNAL1Q9UBT7 734 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 CEMIPQ8WUJ3 1361 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 POTECB2RU33 542 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 LIN7AO14910 233 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 FOXD2O60548 495 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 KATNA1O75449 491 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 FLT3LGP49771 235 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 RAD23BP54727 409 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 GEMP55040 296 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 GPS1Q13098 491 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 LRRC41Q15345 812 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 PTGISQ16647 500 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 CEP55Q53EZ4 464 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 C12orf60Q5U649 245 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 PAPD7Q5XG87 772 aaKnown RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 DSG4Q86SJ6 1040 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 LONP2Q86WA8 852 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 B3GALNT2Q8NCR0 500 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 SEC16BQ96JE7 1060 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 PCIF1Q9H4Z3 704 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 VCPKMTQ9H867 229 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 VTA1Q9NP79 307 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 ERAP1Q9NZ08 941 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 PCDHA10Q9Y5I2 948 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 PRR36Q9H6K5 1346 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 MYOM1P52179 1685 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 A0A0G2JND7 137 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 TTLL13PA6NNM8 815 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 GOLGA8SH3BPF8 625 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 ANXA9O76027 345 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 ALDH2P05091 517 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 LAG3P18627 525 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 PLA2G4AP47712 749 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 FMO5P49326 533 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 OXCT1P55809 520 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 PEX3P56589 373 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 TOP3AQ13472 1001 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 PAN2Q504Q3 1202 aaKnown RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 CENPPQ6IPU0 288 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 SLC22A9Q8IVM8 553 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 TDRD5Q8NAT2 981 aaKnown RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 DACT3Q96B18 629 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 MCCC1Q96RQ3 725 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 SH3GL1Q99961 368 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 SPATA16Q9BXB7 569 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 FAM192AQ9GZU8 254 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 CARD9Q9H257 536 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 RAD21L1Q9H4I0 556 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 TMBIM4Q9HC24 238 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 GTSE1Q9NYZ3 720 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 SELENONQ9NZV5 590 aa8.14□□□□□ -1.11
VPS13D-211ENST00000543710 AGO2Q9UKV8 859 aaKnown RBP8.14□□□□□ -1.11
VPS13D-211ENST00000543710 E5RI56 91 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 M0QYT0 321 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 LAMTOR5O43504 91 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 INHAP05111 366 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 RFC2P35250 354 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 SULT1E1P49888 294 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 CACNB3P54284 484 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 POLE2P56282 527 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 EIF3EP60228 445 aaKnown RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 RPL10AP62906 217 aaKnown RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 ENPEPQ07075 957 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 ACAP1Q15027 740 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 KYNUQ16719 465 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 TRPM8Q7Z2W7 1104 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 OSCP1Q8WVF1 389 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 RIN2Q8WYP3 895 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 TADA1Q96BN2 335 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 EHD4Q9H223 541 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 MRPL17Q9NRX2 175 aaKnown RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 HSPBP1Q9NZL4 362 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 GGT7Q9UJ14 662 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 SORCS3Q9UPU3 1222 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 SPEF2Q9C093 1822 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 ATP1A1P05023 1023 aaKnown RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 POLBP06746 335 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms