RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 KDM4CQ9H3R0 1056 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 SMARCAD1Q9H4L7 1026 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 MROH8Q9H579 483 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 CCDC134Q9H6E4 229 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 METTL5Q9NRN9 209 aaKnown RBP12.13□□□□□ -0.47
C11orf54-214ENST00000540113 SIX4Q9UIU6 781 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 AGAP1Q9UPQ3 857 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 PLXNB2O15031 1838 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 GPR25O00155 361 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 SNX3O60493 162 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 TNNC2P02585 160 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 ERBB2P04626 1255 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 KRT3P12035 628 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 OSBPP22059 807 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 STX2P32856 288 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 PSMC1P62191 440 aaKnown RBP12.12□□□□□ -0.47
C11orf54-214ENST00000540113 ARHGAP1Q07960 439 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 EFTUD2Q15029 972 aaKnown RBP eCLIP12.12□□□□□ -0.471e-8■■■■□ 20.3
C11orf54-214ENST00000540113 PKN2Q16513 984 aaKnown RBP12.12□□□□□ -0.47
C11orf54-214ENST00000540113 SH3PXD2AQ5TCZ1 1133 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 ANKRD22Q5VYY1 191 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 FAM47EQ6ZV65 393 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 FUKQ8N0W3 1084 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 C4orf33Q8N1A6 199 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 TGS1Q96RS0 853 aaKnown RBP12.12□□□□□ -0.47
C11orf54-214ENST00000540113 TPX2Q9ULW0 747 aaKnown RBP12.12□□□□□ -0.47
C11orf54-214ENST00000540113 IQCA1LA6NCM1 817 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 C3orf70A6NLC5 250 aaPredicted RBP12.12□□□□□ -0.47
C11orf54-214ENST00000540113 LACTBL1A8MY62 500 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 HBP1O60381 514 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 LRCH4O75427 683 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 UBOX5O94941 541 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 ITGB3P05106 788 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 FOXN2P32314 431 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 RAD23BP54727 409 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 VCPP55072 806 aaKnown RBP12.12□□□□□ -0.47
C11orf54-214ENST00000540113 OTUD4Q01804 1114 aaKnown RBP12.12□□□□□ -0.47
C11orf54-214ENST00000540113 PDIA2Q13087 525 aaKnown RBP12.12□□□□□ -0.47
C11orf54-214ENST00000540113 OASLQ15646 514 aaKnown RBP12.12□□□□□ -0.47
C11orf54-214ENST00000540113 JADE1Q6IE81 842 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 CGB2Q6NT52 195 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 ARMCX2Q7L311 632 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 FASTKD5Q7L8L6 764 aaKnown RBP12.12□□□□□ -0.47
C11orf54-214ENST00000540113 TRPM8Q7Z2W7 1104 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 C1orf127Q8N9H9 656 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 BBOF1Q8ND07 529 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 UBA3Q8TBC4 463 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 ACTL9Q8TC94 416 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 PPP1R13LQ8WUF5 828 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 CKAP2Q8WWK9 683 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 HSPH1Q92598 858 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 ANKRD36BP1Q96IX9 119 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 SYNCQ9H7C4 482 aa12.12□□□□□ -0.47
C11orf54-214ENST00000540113 TCRBV7S3A2A0A539 114 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 B4GALT4O60513 344 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 CST8O60676 142 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 CDH16O75309 829 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 LSM8O95777 96 aaKnown RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 ATP5DP30049 168 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 SLC26A2P50443 739 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 PIGHQ14442 188 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 TTLL4Q14679 1199 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 MSS51Q4VC12 460 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 CYB5D1Q6P9G0 228 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 MAMDC4Q6UXC1 1216 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 LRRN4Q8WUT4 740 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 ELOVL4Q9GZR5 314 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 NSRP1Q9H0G5 558 aaKnown RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 IFT122Q9HBG6 1241 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 RNF19AQ9NV58 838 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 A0A1W2PPM1 405 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 GRAP2O75791 330 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 EIF4BP23588 611 aaKnown RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 GTF2A1P52655 376 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 WDR4P57081 412 aaKnown RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 SLC25A11Q02978 314 aaKnown RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 TFDP1Q14186 410 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 ITIH4Q14624 930 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 STAT4Q14765 748 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 SURF1Q15526 300 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 RNASEH2BQ5TBB1 312 aaKnown RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 TAPT1Q6NXT6 567 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 NPNTQ6UXI9 565 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 TBC1D1Q86TI0 1168 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 SUGP1Q8IWZ8 645 aaKnown RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 EXOC8Q8IYI6 725 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 MAML1Q92585 1016 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 CCDC77Q9BR77 488 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 RPF1Q9H9Y2 349 aaKnown RBP12.11□□□□□ -0.47
C11orf54-214ENST00000540113 EURLQ9NYK6 297 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 LGALS13Q9UHV8 139 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 PNMA3Q9UL41 463 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 TNFSF13BQ9Y275 285 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 CEP83Q9Y592 693 aa12.11□□□□□ -0.47
C11orf54-214ENST00000540113 A0A087WZ62 844 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 OAS1P00973 400 aaKnown RBP12.1□□□□□ -0.47
C11orf54-214ENST00000540113 VTNP04004 478 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 LGALS2P05162 132 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 INSRRP14616 1297 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 SSTR1P30872 391 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms