RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	ZNF66	Q6ZN08	573 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	BHLHA9	Q7RTU4	235 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	MAVS	Q7Z434	540 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	ZNF804A	Q7Z570	1209 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	YTHDF3	Q7Z739	585 aa	Known RBP	4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	PRR18	Q8N4B5	295 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	LRRC71	Q8N4P6	559 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	RPL36AL	Q969Q0	106 aa	Known RBP	4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	FAM167A	Q96KS9	214 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	SH2D3A	Q9BRG2	576 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	BHMT2	Q9H2M3	363 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	DLL3	Q9NYJ7	618 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	HESX1	Q9UBX0	185 aa		4.19	□□□□□ -1.74
VPS36-205	ENST00000492650	ZNF213	O14771	459 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	ONECUT2	O95948	504 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	IL6R	P08887	468 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	POU2F2	P09086	479 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	NHLRC4	P0CG21	123 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	ENG	P17813	658 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	PTGER1	P34995	402 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	KCNJ5	P48544	419 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	PXN	P49023	591 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	TUBA4A	P68366	448 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	SP2	Q02086	613 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	KLF9	Q13886	244 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	IQCB1	Q15051	598 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	ETFDH	Q16134	617 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	NAPRT	Q6XQN6	538 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	CATIP	Q7Z7H3	387 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	NEK8	Q86SG6	692 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650		Q8N9P0	234 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	BRIX1	Q8TDN6	353 aa	Known RBP	4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	REPS1	Q96D71	796 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	QTRT1	Q9BXR0	403 aa	Known RBP	4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	ASPSCR1	Q9BZE9	553 aa		4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	CCNL1	Q9UK58	526 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS36-205	ENST00000492650	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	TISP43	B9A030	160 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	PRRT4	C9JH25	899 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	PROB1	E7EW31	1015 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	PPP6C	O00743	305 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	DCLK1	O15075	740 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	TP73	O15350	636 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	EIF3J	O75822	258 aa	Known RBP	4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	UNC5C	O95185	931 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	LATS1	O95835	1130 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	FES	P07332	822 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	ATXN1L	P0C7T5	689 aa	Known RBP	4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	HDC	P19113	662 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	LOXL3	P58215	753 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	LILRA4	P59901	499 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	KHDC1L	Q5JSQ8	128 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	CEP78	Q5JTW2	689 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	SLC18B1	Q6NT16	456 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	DENND1A	Q8TEH3	1009 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	XAGE5	Q8WWM1	108 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	HSPBAP1	Q96EW2	488 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	PTDSS2	Q9BVG9	487 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	GLOD4	Q9HC38	313 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	SARS2	Q9NP81	518 aa	Known RBP	4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	DUSP22	Q9NRW4	184 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	DDX56	Q9NY93	547 aa	Known RBP	4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	PCDHA6	Q9UN73	950 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	BTBD3	Q9Y2F9	522 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	LUC7L2	Q9Y383	392 aa	Known RBP	4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	ZNF521	Q96K83	1311 aa		4.17	□□□□□ -1.74
VPS36-205	ENST00000492650	DNAJB5	O75953	348 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	BMP15	O95972	392 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	S100B	P04271	92 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	GRP	P07492	148 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	NPS	P0C0P6	89 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	SOX8	P57073	446 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	E2F2	Q14209	437 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	PLS1	Q14651	629 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	SUPT20HL1	Q3ZLR7	823 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	MORN5	Q5VZ52	161 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	SLC9A4	Q6AI14	798 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	C11orf87	Q6NUJ2	197 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	PARS2	Q7L3T8	475 aa	Known RBP	4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	CCAR1	Q8IX12	1150 aa	Known RBP	4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	PNLDC1	Q8NA58	520 aa	Known RBP	4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	STAG1	Q8WVM7	1258 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	ATG4A	Q8WYN0	398 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	PMM1	Q92871	262 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	R3HDM4	Q96D70	268 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	SLC35A4	Q96G79	324 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	MOGAT1	Q96PD6	335 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	FCRL4	Q96PJ5	515 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	GTPBP4	Q9BZE4	634 aa	Known RBP	4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	SH2B3	Q9UQQ2	575 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650	TBC1D30	Q9Y2I9	924 aa		4.16	□□□□□ -1.74
VPS36-205	ENST00000492650		A1L4Q6	167 aa		4.15	□□□□□ -1.75
VPS36-205	ENST00000492650	TUBB4A	P04350	444 aa		4.15	□□□□□ -1.75
VPS36-205	ENST00000492650	IGKV2-30	P06310	120 aa		4.15	□□□□□ -1.75
VPS36-205	ENST00000492650	PPIF	P30405	207 aa	Known RBP	4.15	□□□□□ -1.75
VPS36-205	ENST00000492650	CYP4F2	P78329	520 aa		4.15	□□□□□ -1.75
VPS36-205	ENST00000492650	NKX6-1	P78426	367 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS36-205	ENST00000492650	HOXA4	Q00056	320 aa	Predicted RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms