RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 MYBPC2Q14324 1141 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 PLEKHG6Q3KR16 790 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 LRRTM3Q86VH5 581 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 MON1AQ86VX9 555 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 C12orf40Q86WS4 652 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 PGBD3Q8N328 593 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 ATP2A3Q93084 1043 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 PRDM16Q9HAZ2 1276 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 KIAA1522Q9P206 1035 aaPredicted RBP16.52■□□□□ 0.24
U2AF1-211ENST00000486519 COL12A1Q99715 3063 aa16.52■□□□□ 0.23
U2AF1-211ENST00000486519 TCHHQ07283 1943 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 PTPN13Q12923 2485 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 AP5Z1O43299 807 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 SYPP08247 313 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 PROZP22891 400 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 MAOBP27338 520 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 DPP6P42658 865 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 CLDN6P56747 220 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 ZXDBP98169 803 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 ZNF268Q14587 947 aaPredicted RBP16.51■□□□□ 0.23
U2AF1-211ENST00000486519 VEPH1Q14D04 833 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 RNF20Q5VTR2 975 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 PADI6Q6TGC4 694 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 USP37Q86T82 979 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 TRIML1Q8N9V2 468 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 SETD7Q8WTS6 366 aaKnown RBP16.51■□□□□ 0.23
U2AF1-211ENST00000486519 HSPA12BQ96MM6 686 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 STK24Q9Y6E0 443 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 SPTA1P02549 2419 aa16.51■□□□□ 0.23
U2AF1-211ENST00000486519 IGHV1OR15-9A0A0B4J2B8 117 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 PLK4O00444 970 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 SCAMP3O14828 347 aaKnown RBP16.5■□□□□ 0.23
U2AF1-211ENST00000486519 KRT10P13645 584 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 GABRG2P18507 467 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 CYP11B2P19099 503 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 KIR2DL1P43626 348 aaPredicted RBP16.5■□□□□ 0.23
U2AF1-211ENST00000486519 MRPS21P82921 87 aaKnown RBP16.5■□□□□ 0.23
U2AF1-211ENST00000486519 SSRP1Q08945 709 aaKnown RBP16.5■□□□□ 0.23
U2AF1-211ENST00000486519 LMBRD2Q68DH5 695 aaPredicted RBP16.5■□□□□ 0.23
U2AF1-211ENST00000486519 DSTYKQ6XUX3 929 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 CATSPER3Q86XQ3 398 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 SLFN12Q8IYM2 578 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 LSM14AQ8ND56 463 aaKnown RBP16.5■□□□□ 0.23
U2AF1-211ENST00000486519 LRRC15Q8TF66 581 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 PNMA5Q96PV4 448 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 TTC12Q9H892 705 aaPredicted RBP16.5■□□□□ 0.23
U2AF1-211ENST00000486519 CALCOCO1Q9P1Z2 691 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 PCDHA12Q9UN75 941 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 MAGED2Q9UNF1 606 aaPredicted RBP16.5■□□□□ 0.23
U2AF1-211ENST00000486519 BTBD3Q9Y2F9 522 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 MYLKQ15746 1914 aa16.5■□□□□ 0.23
U2AF1-211ENST00000486519 CXCL8P10145 99 aa16.49■□□□□ 0.23
U2AF1-211ENST00000486519 HAPLN1P10915 354 aaPredicted RBP16.49■□□□□ 0.23
U2AF1-211ENST00000486519 XRCC6P12956 609 aaKnown RBP eCLIP16.49■□□□□ 0.23
U2AF1-211ENST00000486519 LRPAP1P30533 357 aa16.49■□□□□ 0.23
U2AF1-211ENST00000486519 BNC1Q01954 994 aa16.49■□□□□ 0.23
U2AF1-211ENST00000486519 FAM160A1Q05DH4 1040 aa16.49■□□□□ 0.23
U2AF1-211ENST00000486519 FAM181AQ8N9Y4 354 aa16.49■□□□□ 0.23
U2AF1-211ENST00000486519 EXOC4Q96A65 974 aa16.49■□□□□ 0.23
U2AF1-211ENST00000486519 LARP6Q9BRS8 491 aaKnown RBP16.49■□□□□ 0.23
U2AF1-211ENST00000486519 AGXT2Q9BYV1 514 aa16.49■□□□□ 0.23
U2AF1-211ENST00000486519 ZCWPW1Q9H0M4 648 aa16.49■□□□□ 0.23
U2AF1-211ENST00000486519 PIEZO2Q9H5I5 2752 aa16.49■□□□□ 0.23
U2AF1-211ENST00000486519 TRPC7Q9HCX4 862 aa16.49■□□□□ 0.23
U2AF1-211ENST00000486519 FNDC3AQ9Y2H6 1198 aaKnown RBP16.49■□□□□ 0.23
U2AF1-211ENST00000486519 A0A1W2PQD8 194 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 K7ERI5 159 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
U2AF1-211ENST00000486519 TYMPP19971 482 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 DDX6P26196 483 aaKnown RBP eCLIP16.48■□□□□ 0.23
U2AF1-211ENST00000486519 TXKP42681 527 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 TUFMP49411 452 aaKnown RBP16.48■□□□□ 0.23
U2AF1-211ENST00000486519 MYO1EQ12965 1108 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 TAF12Q16514 161 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 SH3RF2Q8TEC5 729 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 NACC1Q96RE7 527 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 OXCT2Q9BYC2 517 aaPredicted RBP16.48■□□□□ 0.23
U2AF1-211ENST00000486519 HAPLN2Q9GZV7 340 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 TMLHEQ9NVH6 421 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 ABI2Q9NYB9 513 aaPredicted RBP16.48■□□□□ 0.23
U2AF1-211ENST00000486519 HSFX1Q9UBD0 423 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 HCN2Q9UL51 889 aa16.48■□□□□ 0.23
U2AF1-211ENST00000486519 C2orf78A6NCI8 922 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 DEXIO95424 95 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 CYP17A1P05093 508 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 MCF2P10911 925 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 EFNA5P52803 228 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 KDSRQ06136 332 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 SCRN1Q12765 414 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 ZBTB6Q15916 424 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 CCDC157Q569K6 752 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 GALNT17Q6IS24 598 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 ARMCX5Q6P1M9 558 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 FMNL3Q8IVF7 1028 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 TRIM22Q8IYM9 498 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 PDCD7Q8N8D1 485 aaKnown RBP16.47■□□□□ 0.23
U2AF1-211ENST00000486519 ARL14EPQ8N8R7 260 aaPredicted RBP16.47■□□□□ 0.23
U2AF1-211ENST00000486519 MRPS31Q92665 395 aaKnown RBP16.47■□□□□ 0.23
U2AF1-211ENST00000486519 SENP8Q96LD8 212 aa16.47■□□□□ 0.23
U2AF1-211ENST00000486519 YTHDC1Q96MU7 727 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms