RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 CFAP157Q5JU67 520 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 DENND2CQ68D51 928 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 OR52E8Q6IFG1 317 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 GPAT2Q6NUI2 795 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 DNAJC24Q6P3W2 148 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 SYN2Q92777 582 aaPredicted RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 CAVIN3Q969G5 261 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 NGRNQ9NPE2 291 aaKnown RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 ADARB2Q9NS39 739 aaKnown RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 SETD4Q9NVD3 440 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 CACNG4Q9UBN1 327 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 TJP2Q9UDY2 1190 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 CITO14578 2027 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 COL11A2P13942 1736 aaPredicted RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 SPATA31D3P0C874 917 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 RALAP11233 206 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 PPP2R5DQ14738 602 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 COBLL1Q53SF7 1204 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 ABHD15Q6UXT9 468 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 SPATA31D4Q6ZUB0 917 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 MAP4K3Q8IVH8 894 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 SCUBE1Q8IWY4 988 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 SRPK1Q96SB4 655 aaKnown RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 SYT17Q9BSW7 474 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 RPF1Q9H9Y2 349 aaKnown RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 TMBIM4Q9HC24 238 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 BOLA2-SMG1P6H3BVE0 249 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 SGK1O00141 431 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 ZSCAN5DPP0CG00 497 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 TROVE2P10155 538 aaKnown RBP eCLIP12.94□□□□□ -0.34
USP11-206ENST00000469080 MAPTP10636 758 aaKnown RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 ALADP13716 330 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 OSBPP22059 807 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 HSD17B3P37058 310 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 BMT2Q1RMZ1 405 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.94□□□□□ -0.34
USP11-206ENST00000469080 PAN2Q504Q3 1202 aaKnown RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 PPP6R3Q5H9R7 873 aaPredicted RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 OR6B2Q6IFH4 312 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 USP33Q8TEY7 942 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 XPO6Q96QU8 1125 aaKnown RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 NUDCD1Q96RS6 583 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 CHST7Q9NS84 486 aa12.94□□□□□ -0.34
USP11-206ENST00000469080 MTRF1LQ9UGC7 380 aaKnown RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 TMA7Q9Y2S6 64 aaKnown RBP12.94□□□□□ -0.34
USP11-206ENST00000469080 GOLGA4Q13439 2230 aaKnown RBP12.93□□□□□ -0.34
USP11-206ENST00000469080 SRRM3A6NNA2 597 aaPredicted RBP12.93□□□□□ -0.34
USP11-206ENST00000469080 SHBGP04278 402 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 GSTA2P09210 222 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 SERPINB3P29508 390 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 CETN2P41208 172 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 PSMD7P51665 324 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 LONRF1Q17RB8 773 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 JAMLQ86YT9 394 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 RHOT2Q8IXI1 618 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.93□□□□□ -0.348e-14■■□□□ 11.4
USP11-206ENST00000469080 ATP8B4Q8TF62 1192 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 FAM149B1Q96BN6 582 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 KCND2Q9NZV8 630 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 TDRKHQ9Y2W6 561 aaKnown RBP12.93□□□□□ -0.34
USP11-206ENST00000469080 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
USP11-206ENST00000469080 LRRC42Q9Y546 428 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 N6AMT1Q9Y5N5 214 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 C5orf60A6NFR6 353 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 DCDC2CA8MYV0 355 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 EDN1P05305 212 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 C1orf220Q5T0J3 134 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 CHADLQ6NUI6 762 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 CATSPER4Q7RTX7 472 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 LPIN3Q9BQK8 851 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 VPS37BQ9H9H4 285 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 DMAC2Q9NW81 257 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 TTLL3Q9Y4R7 772 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 MAGEB3O15480 346 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 ETS1P14921 441 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 TCF4P15884 667 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 AKAP5P24588 427 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 YY1P25490 414 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 MARSP56192 900 aaKnown RBP12.93□□□□□ -0.34
USP11-206ENST00000469080 UBAP2Q5T6F2 1119 aaKnown RBP12.93□□□□□ -0.34
USP11-206ENST00000469080 ERO1BQ86YB8 467 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 LZICQ8WZA0 190 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 LRRC45Q96CN5 670 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 OSBPL10Q9BXB5 764 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 MRPL4Q9BYD3 311 aaKnown RBP12.93□□□□□ -0.34
USP11-206ENST00000469080 FBXO9Q9UK97 447 aaPredicted RBP12.93□□□□□ -0.34
USP11-206ENST00000469080 PNMA2Q9UL42 364 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 TSC22D4Q9Y3Q8 395 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 SPO11Q9Y5K1 396 aa12.93□□□□□ -0.34
USP11-206ENST00000469080 RGS16O15492 202 aaPredicted RBP12.92□□□□□ -0.34
USP11-206ENST00000469080 EXTL3O43909 919 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 CELF2O95319 508 aaKnown RBP12.92□□□□□ -0.34
USP11-206ENST00000469080 GPC3P51654 580 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 NRLP54845 237 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 MTTPP55157 894 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 BEX3Q00994 111 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 KRT17Q04695 432 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 ATF7IP2Q5U623 682 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 IRGCQ6NXR0 463 aa12.92□□□□□ -0.34
USP11-206ENST00000469080 LRRC34Q8IZ02 419 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 251.4 ms