RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ZWILCHQ9H900 591 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 TJP2Q9UDY2 1190 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 SEPT9Q9UHD8 586 aaPredicted RBP12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 ZNRF3Q9ULT6 936 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 CHMP2BQ9UQN3 213 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 WASF2Q9Y6W5 498 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 ATP2A1O14983 1001 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 GYG2O15488 501 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 SMIM24O75264 130 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 ITGAVP06756 1048 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 CD48P09326 243 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 HARSP12081 509 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 VHLP40337 213 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 JAK3P52333 1124 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 ARFIP2P53365 341 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 MDH1BQ5I0G3 518 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 ALYREFQ86V81 257 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 SCYL3Q8IZE3 742 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 SKA1Q96BD8 255 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 RMDN3Q96TC7 470 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 DHRS4Q9BTZ2 278 aa12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 ZNF70Q9UC06 446 aaPredicted RBP12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 DRG1Q9Y295 367 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 COL2A1P02458 1487 aaPredicted RBP12.32□□□□□ -0.44
PDZRN3-203ENST00000462146 TCRBV5S1A1TA0A578 114 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 PLA2G6O60733 806 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 CCDC22O60826 627 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 CLDN10P78369 228 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 NBPF20Q3BBV1 942 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 SWSAP1Q6NVH7 229 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 DNAJC24Q6P3W2 148 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 DCUN1D2Q6PH85 259 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 TRIM72Q6ZMU5 477 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 KBTBD2Q8IY47 623 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 NAT8LQ8N9F0 302 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 SLC35B2Q8TB61 432 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 TEKT4Q8WW24 435 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 VCPIP1Q96JH7 1222 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 PDCD2LQ9BRP1 358 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 TRIM55Q9BYV6 548 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 ACSS3Q9H6R3 686 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 ARHGEF4Q9NR80 690 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 TAS2R1Q9NYW7 299 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 RBAKQ9NYW8 714 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 AGO2Q9UKV8 859 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 TNS1Q9HBL0 1735 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 FER1L6Q2WGJ9 1857 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 FAM237BA0A1B0GVD1 139 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 C3orf70A6NLC5 250 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 LPXNO60711 386 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 PSMG1O95456 288 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 AMPD1P23109 780 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 CHRNA5P30532 468 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 RPL22P35268 128 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 CMPK2Q5EBM0 449 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 FOXB2Q5VYV0 432 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 ZC3H18Q86VM9 953 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 UNC45BQ8IWX7 931 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 ATP11CQ8NB49 1132 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 NKD2Q969F2 451 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 TMEM143Q96AN5 459 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 NSL1Q96IY1 281 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 TSC22D3Q99576 134 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 PXMP2Q9NR77 195 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 TMOD2Q9NZR1 351 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 ARHGAP28Q9P2N2 729 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 STOML1Q9UBI4 398 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 SNCAIPQ9Y6H5 919 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 KIF3CO14782 793 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 FAM155BO75949 473 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 CST3P01034 146 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 IL1R2P27930 398 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 ARL4CP56559 192 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 CDK16Q00536 496 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 KRT76Q01546 638 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 ZBTB16Q05516 673 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 MCL1Q07820 350 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 MTERF2Q49AM1 385 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 SPDYAQ5MJ70 313 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 LRRC74BQ6ZQY2 392 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 CCDC60Q8IWA6 550 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 PPIL6Q8IXY8 311 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 SH3TC2Q8TF17 1288 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 FAM151AQ8WW52 585 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 WNK4Q96J92 1243 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 MECRQ9BV79 373 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 SSU72Q9NP77 194 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 PCDHA10Q9Y5I2 948 aa12.31□□□□□ -0.44
PDZRN3-203ENST00000462146 MGAMO43451 1857 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 CST8O60676 142 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 AP1G2O75843 785 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 FESP07332 822 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 DLDP09622 509 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 MYL2P10916 166 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 OR52E8Q6IFG1 317 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 PALM2Q8IXS6 379 aa12.3□□□□□ -0.44
PDZRN3-203ENST00000462146 ARFGAP1Q8N6T3 406 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms