RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CCDC47Q96A33 483 aaKnown RBP20.25■□□□□ 0.83
COL5A1-203ENST00000460264 XYLT2Q9H1B5 865 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 CRTAC1Q9NQ79 661 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 USP34Q70CQ2 3546 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 FANCMQ8IYD8 2048 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 ZNF263O14978 683 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 TACC1O75410 805 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 F11P03951 625 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 TARSP26639 723 aaKnown RBP20.24■□□□□ 0.83
COL5A1-203ENST00000460264 TNNC1P63316 161 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 TRPC3Q13507 836 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 WDR72Q3MJ13 1102 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 ZNF852Q6ZMS4 543 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 C4orf50Q6ZRC1 276 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 MYLPFQ96A32 169 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 LRRC3BQ96PB8 259 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 MRPL45Q9BRJ2 306 aaKnown RBP20.24■□□□□ 0.83
COL5A1-203ENST00000460264 OBP2AQ9NY56 170 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 NME7Q9Y5B8 376 aa20.24■□□□□ 0.83
COL5A1-203ENST00000460264 PHACTR2O75167 634 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 NOL4O94818 638 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 PDGFRBP09619 1106 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 ATICP31939 592 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 MAGEA11P43364 429 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 AP3M2P53677 418 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 BIRC3Q13489 604 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 KCNB1Q14721 858 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 MAPRE1Q15691 268 aaKnown RBP20.23■□□□□ 0.83
COL5A1-203ENST00000460264 YAF2Q8IY57 180 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 SYAP1Q96A49 352 aaPredicted RBP20.23■□□□□ 0.83
COL5A1-203ENST00000460264 TRMT2BQ96GJ1 504 aaKnown RBP20.23■□□□□ 0.83
COL5A1-203ENST00000460264 NELL2Q99435 816 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 SLC46A2Q9BY10 475 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 BCO2Q9BYV7 579 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 SNX25Q9H3E2 840 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 ZMYM5Q9UJ78 669 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 MAGED2Q9UNF1 606 aaPredicted RBP20.23■□□□□ 0.83
COL5A1-203ENST00000460264 TRAF3IP3Q9Y228 551 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 MRPS17Q9Y2R5 130 aaKnown RBP20.23■□□□□ 0.83
COL5A1-203ENST00000460264 PIAS3Q9Y6X2 628 aa20.23■□□□□ 0.83
COL5A1-203ENST00000460264 HELZP42694 1942 aaKnown RBP20.22■□□□□ 0.83
COL5A1-203ENST00000460264 SLC38A8A6NNN8 435 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 DPYSL4O14531 572 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 CHADO15335 359 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 CALUO43852 315 aaPredicted RBP20.22■□□□□ 0.83
COL5A1-203ENST00000460264 TADA3O75528 432 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 KIF20AO95235 890 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 FAM163BP0C2L3 166 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 DLG4P78352 724 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 NUCB2P80303 420 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 FRMD5Q7Z6J6 570 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 C1orf210Q8IVY1 113 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 SCN4BQ8IWT1 228 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 CLDN23Q96B33 292 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 MYRFLQ96LU7 910 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 SMG9Q9H0W8 520 aaKnown RBP20.22■□□□□ 0.83
COL5A1-203ENST00000460264 VRTNQ9H8Y1 702 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 NXF1Q9UBU9 619 aaKnown RBP20.22■□□□□ 0.83
COL5A1-203ENST00000460264 MAPK8IP1Q9UQF2 711 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 MYO15AQ9UKN7 3530 aa20.22■□□□□ 0.83
COL5A1-203ENST00000460264 MAN2B1O00754 1011 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 GFRA3O60609 400 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 VNN1O95497 513 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 C4BPAP04003 597 aaKnown RBP20.21■□□□□ 0.83
COL5A1-203ENST00000460264 DDX6P26196 483 aaKnown RBP eCLIP20.21■□□□□ 0.83
COL5A1-203ENST00000460264 GNL1P36915 607 aaPredicted RBP20.21■□□□□ 0.83
COL5A1-203ENST00000460264 MAGEA9P43362 315 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 NCOA4Q13772 614 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 ZNF699Q32M78 642 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 CEP135Q66GS9 1140 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 VSTM1Q6UX27 236 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 CMTM8Q8IZV2 173 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 FMR1NBQ8N0W7 255 aaPredicted RBP20.21■□□□□ 0.83
COL5A1-203ENST00000460264 ZNF687Q8N1G0 1237 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 GUF1Q8N442 669 aaKnown RBP20.21■□□□□ 0.83
COL5A1-203ENST00000460264 OR6B3Q8NGW1 331 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 MYCBPAPQ8TBZ2 947 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 TMC2Q8TDI7 906 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 MRPS31Q92665 395 aaKnown RBP20.21■□□□□ 0.83
COL5A1-203ENST00000460264 PCED1BQ96HM7 432 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 SMYD3Q9H7B4 428 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 MAGEC2Q9UBF1 373 aaPredicted RBP20.21■□□□□ 0.83
COL5A1-203ENST00000460264 UXTQ9UBK9 157 aaPredicted RBP20.21■□□□□ 0.83
COL5A1-203ENST00000460264 FRMD4BQ9Y2L6 1034 aa20.21■□□□□ 0.83
COL5A1-203ENST00000460264 BDNFP23560 247 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 NR2F2P24468 414 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 RPS9P46781 194 aaKnown RBP20.2■□□□□ 0.82
COL5A1-203ENST00000460264 CYP27A1Q02318 531 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 FZD5Q13467 585 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 NFIL3Q16649 462 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 ZACNQ401N2 412 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 ARHGAP29Q52LW3 1261 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 MDH1BQ5I0G3 518 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 TXNDC8Q6A555 127 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 MAB21L3Q8N8X9 362 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 BPIFB1Q8TDL5 484 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 CSGALNACT1Q8TDX6 532 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 ZFYVE19Q96K21 471 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 DPEP3Q9H4B8 488 aa20.2■□□□□ 0.82
COL5A1-203ENST00000460264 SPATA6Q9NWH7 488 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms