RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 LPIN3Q9BQK8 851 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 CORO1BQ9BR76 489 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 RHOBTB2Q9BYZ6 727 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 DPEP3Q9H4B8 488 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 APOBEC3GQ9HC16 384 aaKnown RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 CEP72Q9P209 647 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 MAGEC2Q9UBF1 373 aaPredicted RBP10.77□□□□□ -0.69
RFX3-210ENST00000457373 NR2E1Q9Y466 385 aa10.77□□□□□ -0.69
RFX3-210ENST00000457373 NOTCH4Q99466 2003 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 PAPLNO95428 1278 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 RHOP08100 348 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 MYL4P12829 197 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 FSHRP23945 695 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 CYP2F1P24903 491 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 ERCC5P28715 1186 aaPredicted RBP10.76□□□□□ -0.69
RFX3-210ENST00000457373 TUFMP49411 452 aaKnown RBP10.76□□□□□ -0.69
RFX3-210ENST00000457373 GPR15P49685 360 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 EPHB3P54753 998 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 CYP27A1Q02318 531 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 KCNH2Q12809 1159 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 LRMPQ12912 555 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 PLD1Q13393 1074 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 PABPC1LQ4VXU2 614 aaKnown RBP10.76□□□□□ -0.69
RFX3-210ENST00000457373 MDH1BQ5I0G3 518 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 WDR44Q5JSH3 913 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 SDHAF4Q5VUM1 108 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 IQCEQ6IPM2 695 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 CAVIN1Q6NZI2 390 aaKnown RBP10.76□□□□□ -0.69
RFX3-210ENST00000457373 FAM171BQ6P995 826 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 TRIM59Q8IWR1 403 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 TDRD5Q8NAT2 981 aaKnown RBP10.76□□□□□ -0.69
RFX3-210ENST00000457373 TATDN2Q93075 761 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 CNOT6LQ96LI5 555 aaKnown RBP10.76□□□□□ -0.69
RFX3-210ENST00000457373 PKMYT1Q99640 499 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 CRTAC1Q9NQ79 661 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.76□□□□□ -0.69
RFX3-210ENST00000457373 TRANK1O15050 2925 aa10.76□□□□□ -0.69
RFX3-210ENST00000457373 TNFRSF10AO00220 468 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 AFPP02771 609 aaKnown RBP10.75□□□□□ -0.69
RFX3-210ENST00000457373 POU2F2P09086 479 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 PTPN1P18031 435 aaKnown RBP10.75□□□□□ -0.69
RFX3-210ENST00000457373 CD58P19256 250 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 ASPAP45381 313 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 MTIF2P46199 727 aaKnown RBP10.75□□□□□ -0.69
RFX3-210ENST00000457373 NDST1P52848 882 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 MARSP56192 900 aaKnown RBP10.75□□□□□ -0.69
RFX3-210ENST00000457373 ORC1Q13415 861 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 TAF12Q16514 161 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 DDR2Q16832 855 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 HSP90AA4PQ58FG1 418 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 CYP4A22Q5TCH4 519 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 C4orf50Q6ZRC1 276 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 PDZD4Q76G19 769 aaPredicted RBP10.75□□□□□ -0.69
RFX3-210ENST00000457373 OTOP3Q7RTS5 596 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 ACOT1Q86TX2 421 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 RNF135Q8IUD6 432 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 SCN4BQ8IWT1 228 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 STKLD1Q8NE28 680 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 ITFG1Q8TB96 612 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 GPR152Q8TDT2 470 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 ING5Q8WYH8 240 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 MYLPFQ96A32 169 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 MYADMQ96S97 322 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 NIF3L1Q9GZT8 377 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 DNAJC25Q9H1X3 360 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 PRM3Q9NNZ6 103 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 ANO10Q9NW15 660 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 HSFX1Q9UBD0 423 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 USTQ9Y2C2 406 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 COQ4Q9Y3A0 265 aa10.75□□□□□ -0.69
RFX3-210ENST00000457373 MRPS23Q9Y3D9 190 aaKnown RBP10.75□□□□□ -0.69
RFX3-210ENST00000457373 MYH10P35580 1976 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 MYO10Q9HD67 2058 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 CLDN5O00501 218 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 N4BP1O75113 896 aaKnown RBP10.74□□□□□ -0.69
RFX3-210ENST00000457373 GJA1P17302 382 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 ATF6P18850 670 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 PTMSP20962 102 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 BDNFP23560 247 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 RPL10AP62906 217 aaKnown RBP10.74□□□□□ -0.69
RFX3-210ENST00000457373 CETN1Q12798 172 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 VEPH1Q14D04 833 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 MAPRE1Q15691 268 aaKnown RBP10.74□□□□□ -0.69
RFX3-210ENST00000457373 STX1AQ16623 288 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 SLC5A9Q2M3M2 681 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 ZNF394Q53GI3 561 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 CT47A1Q5JQC4 288 aaPredicted RBP10.74□□□□□ -0.69
RFX3-210ENST00000457373 C11orf57Q6ZUT1 292 aaPredicted RBP10.74□□□□□ -0.69
RFX3-210ENST00000457373 DNAJB7Q7Z6W7 309 aaPredicted RBP10.74□□□□□ -0.69
RFX3-210ENST00000457373 ITIH5Q86UX2 942 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 IRF2BP1Q8IU81 584 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 FAM114A1Q8IWE2 563 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 B3GALNT2Q8NCR0 500 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 EHBP1Q8NDI1 1231 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 ST13P5Q8NFI4 369 aaPredicted RBP10.74□□□□□ -0.69
RFX3-210ENST00000457373 MYCBPAPQ8TBZ2 947 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 TCEAL4Q96EI5 215 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 MCRS1Q96EZ8 462 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 PCED1BQ96HM7 432 aa10.74□□□□□ -0.69
RFX3-210ENST00000457373 TNIP3Q96KP6 325 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms