RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 NSMCE4AQ9NXX6 385 aa8.26□□□□□ -1.09
BRCC3-208ENST00000453705 MOSPD1Q9UJG1 213 aa8.26□□□□□ -1.09
BRCC3-208ENST00000453705 CPSF3Q9UKF6 684 aaKnown RBP8.26□□□□□ -1.09
BRCC3-208ENST00000453705 BAZ2BQ9UIF8 2168 aaKnown RBP8.25□□□□□ -1.09
BRCC3-208ENST00000453705 TMEM229AB2RXF0 380 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 PI4K2BG5E9Z4 385 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 USP1O94782 785 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 RPSAP08865 295 aaKnown RBP8.25□□□□□ -1.09
BRCC3-208ENST00000453705 ESRRAP11474 423 aaPredicted RBP8.25□□□□□ -1.09
BRCC3-208ENST00000453705 PLTPP55058 493 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 CAMK2GQ13555 558 aaPredicted RBP8.25□□□□□ -1.09
BRCC3-208ENST00000453705 NONOQ15233 471 aaKnown RBP eCLIP8.25□□□□□ -1.09
BRCC3-208ENST00000453705 HSP90AA4PQ58FG1 418 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 SH3PXD2AQ5TCZ1 1133 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 POTEEQ6S8J3 1075 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 LBX2Q6XYB7 198 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 B4GALNT4Q76KP1 1039 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 SLITRK4Q8IW52 837 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 CNNM3Q8NE01 707 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 CRYGNQ8WXF5 182 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 CRACR2AQ9BSW2 395 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 HSD3B7Q9H2F3 369 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 MRPL46Q9H2W6 279 aaKnown RBP8.25□□□□□ -1.09
BRCC3-208ENST00000453705 GLRX2Q9NS18 164 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.25□□□□□ -1.09
BRCC3-208ENST00000453705 LRFN1Q9P244 771 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 DNAJB9Q9UBS3 223 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 SEC63Q9UGP8 760 aaKnown RBP8.25□□□□□ -1.09
BRCC3-208ENST00000453705 ZNRF3Q9ULT6 936 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 A0A087X0M5 115 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 A0A1B0GX30 115 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 GOLGA6L19H0YKK7 550 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 MAN1A2O60476 641 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 ZBED1O96006 694 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 VAV1P15498 845 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 ZNF18P17022 549 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 CDC25CP30307 473 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 VPS41P49754 854 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 GSDMDP57764 484 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 ADCY2Q08462 1091 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 PDIA5Q14554 519 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 CFAP100Q494V2 611 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 CORO6Q6QEF8 472 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 ZNF574Q6ZN55 896 aaPredicted RBP8.25□□□□□ -1.09
BRCC3-208ENST00000453705 LUZP1Q86V48 1076 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 CMTR1Q8N1G2 835 aaKnown RBP8.25□□□□□ -1.09
BRCC3-208ENST00000453705 EXOC4Q96A65 974 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 CLIC6Q96NY7 704 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 MTMR9Q96QG7 549 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 C11orf16Q9NQ32 467 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 MAN1B1Q9UKM7 699 aa8.25□□□□□ -1.09
BRCC3-208ENST00000453705 TRAV6A0A075B6T7 132 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 ZBTB5O15062 677 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 ZEB2O60315 1214 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 FSBPO95073 299 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 SERPINC1P01008 464 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 ACTN1P12814 892 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 RHOQP17081 205 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 CDH3P22223 829 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 HNF1BP35680 557 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 PSMC4P43686 418 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 USP11P51784 963 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 HNRNPH2P55795 449 aaKnown RBP8.24□□□□□ -1.09
BRCC3-208ENST00000453705 MYL6P60660 151 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 COG7P83436 770 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 ARHGAP8P85298 464 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 MYL5Q02045 173 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 COG2Q14746 738 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 ARID5BQ14865 1188 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 IL17AQ16552 155 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 SIAH1Q8IUQ4 282 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 IGSF22Q8N9C0 903 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 IQUBQ8NA54 791 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 ATP11CQ8NB49 1132 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 ZNF280CQ8ND82 737 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 TMEM120AQ9BXJ8 343 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 FHDC1Q9C0D6 1143 aaPredicted RBP8.24□□□□□ -1.09
BRCC3-208ENST00000453705 JMJD4Q9H9V9 463 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 FETUBQ9UGM5 382 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 RSPH14Q9UHP6 348 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 FAM205CA6NFA0 338 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 NFKBIEO00221 500 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 CSTBP04080 98 aaKnown RBP8.24□□□□□ -1.09
BRCC3-208ENST00000453705 LTA4HP09960 611 aaKnown RBP8.24□□□□□ -1.09
BRCC3-208ENST00000453705 ATP5DP30049 168 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 PSMC6P62333 389 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 DPCR1Q3MIW9 517 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 AARDQ4LEZ3 155 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 NLRC3Q7RTR2 1065 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 NEK8Q86SG6 692 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 GPR149Q86SP6 731 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 ZNF527Q8NB42 609 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 VPS50Q96JG6 964 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 CDC6Q99741 560 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 DDX50Q9BQ39 737 aaKnown RBP8.24□□□□□ -1.09
BRCC3-208ENST00000453705 UQCC2Q9BRT2 126 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 OR10A4Q9H209 315 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 WASH6PQ9NQA3 447 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 RMND1Q9NWS8 449 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms