RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 C11orf88Q6PI97 169 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 C1orf228Q6PIY5 440 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 LDHAL6AQ6ZMR3 332 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCDC81Q6ZN84 652 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 RUFY4Q6ZNE9 571 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 MFSD6Q6ZSS7 791 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CABP7Q86V35 215 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 APLFQ8IW19 511 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 FAM9CQ8IZT9 166 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 LRRC71Q8N4P6 559 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 LZTR1Q8N653 840 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 XXYLT1Q8NBI6 393 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 SMC1BQ8NDV3 1235 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 OR52K1Q8NGK4 314 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 UTP15Q8TED0 518 aaKnown RBP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 SHC3Q92529 594 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 ARL8AQ96BM9 186 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 ZBTB8AQ96BR9 441 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 FAM167AQ96KS9 214 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 ASB2Q96Q27 587 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 RIOK1Q9BRS2 568 aaKnown RBP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 PARD6BQ9BYG5 372 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 RHOBTB2Q9BYZ6 727 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 MMRN2Q9H8L6 949 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CRLF2Q9HC73 371 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 VPS18Q9P253 973 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 EXTL2Q9UBQ6 330 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 MALT1Q9UDY8 824 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 GJD2Q9UKL4 321 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 NOB1Q9ULX3 412 aaKnown RBP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 ZNF148Q9UQR1 794 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CFL2Q9Y281 166 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 PREX1Q8TCU6 1659 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 KIAA1107Q9UPP5 1409 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 LTBP3Q9NS15 1303 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 ABHD14A-ACY1A0A1B0GW23 586 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 TMEM247A6NEH6 219 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SGK1O00141 431 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 AURKAO14965 403 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SPOPO43791 374 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 USO1O60763 962 aaKnown RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SOCS5O75159 536 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 RPS6KA5O75582 802 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 GLRX3O76003 335 aaKnown RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 RNF8O76064 485 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 OPN1MWP04001 364 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 C8BP07358 591 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 OPN1MW2P0DN77 364 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 OPN1MW3P0DN78 364 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 COL6A2P12110 1019 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 POLR2EP19388 210 aaKnown RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 TFEBP19484 476 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 JAK1P23458 1154 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 GPTP24298 496 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 HNF1BP35680 557 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 PSMC2P35998 433 aaKnown RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 PSMC4P43686 418 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 GPC3P51654 580 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 COG7P83436 770 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 IL1RL1Q01638 556 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SGCGQ13326 291 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 MSLNQ13421 630 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SCARB2Q14108 478 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 FRG1Q14331 258 aaKnown RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 GNA13Q14344 377 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SLC9A5Q14940 896 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 PPA1Q15181 289 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SNCBQ16143 134 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 BCL2A1Q16548 175 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 INSCQ1MX18 579 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCDC57Q2TAC2 916 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCDC153Q494R4 210 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 CEP78Q5JTW2 689 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 GPATCH4Q5T3I0 446 aaKnown RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 NCAPH2Q6IBW4 605 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 RETSATQ6NUM9 610 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCDC62Q6P9F0 684 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SLC30A9Q6PML9 568 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 C4orf50Q6ZRC1 276 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 CLEC17AQ6ZS10 378 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SYTL1Q8IYJ3 562 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 TTC9BQ8N6N2 239 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 NETO2Q8NC67 525 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 KLHDC4Q8TBB5 520 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 CACTINQ8WUQ7 758 aaKnown RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 KCTD13Q8WZ19 329 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 LPIN2Q92539 896 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 GTF3C6Q969F1 213 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 TIFAQ96CG3 184 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 C11orf24Q96F05 449 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 PEX11GQ96HA9 241 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 LOXL4Q96JB6 756 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 TM9SF2Q99805 663 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 GORASP1Q9BQQ3 440 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SPON2Q9BUD6 331 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 NT5C3AQ9H0P0 336 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 SDHAF3Q9NRP4 125 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 TOPORSQ9NS56 1045 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 RRP7BPQ9NSQ0 103 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 EMC3Q9P0I2 261 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms