RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ANKRD12Q6UB98 2062 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 SPECC1L-ADORA2AF8WAN1 911 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 SLC27A1Q6PCB7 646 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 PDCD7Q8N8D1 485 aaKnown RBP12.05□□□□□ -0.48
PTCH1-208ENST00000430669 UPF3AQ9H1J1 476 aaKnown RBP12.05□□□□□ -0.48
PTCH1-208ENST00000430669 CAPN6Q9Y6Q1 641 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 ZBTB22O15209 634 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 GYG2O15488 501 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 PROSCO94903 275 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 NCAM1P13591 858 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 GEMIN4P57678 1058 aaKnown RBP12.05□□□□□ -0.48
PTCH1-208ENST00000430669 CCNG2Q16589 344 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 NOA1Q8NC60 698 aaKnown RBP12.05□□□□□ -0.48
PTCH1-208ENST00000430669 WDR91A4D1P6 747 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 ATMINO43313 823 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-208ENST00000430669 MAPRE2Q15555 327 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 C3orf62Q6ZUJ4 267 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 ZNF831Q5JPB2 1677 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 ANXA9O76027 345 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 HNRNPH3P31942 346 aaKnown RBP12.05□□□□□ -0.48
PTCH1-208ENST00000430669 MAGEA4P43358 317 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 PID1Q7Z2X4 250 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 TAS1R2Q8TE23 839 aa12.05□□□□□ -0.48
PTCH1-208ENST00000430669 CYBBP04839 570 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 EIF4BP23588 611 aaKnown RBP12.04□□□□□ -0.48
PTCH1-208ENST00000430669 TYK2P29597 1187 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 THPOP40225 353 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 ALDH1A3P47895 512 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
PTCH1-208ENST00000430669 ITGA8P53708 1063 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 TDRD10Q5VZ19 366 aaKnown RBP12.04□□□□□ -0.48
PTCH1-208ENST00000430669 SHCBP1Q8NEM2 672 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 PRMT1Q99873 361 aaKnown RBP12.04□□□□□ -0.48
PTCH1-208ENST00000430669 CST8O60676 142 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 FBXO47Q5MNV8 452 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 TRIM67Q6ZTA4 783 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 HSD17B14Q9BPX1 270 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 KCTD10Q9H3F6 313 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 WDCPQ9H6R7 721 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 ARL2BPQ9Y2Y0 163 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 EGFRP00533 1210 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 VTNP04004 478 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 HSD17B3P37058 310 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 RGS7P49802 495 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 CLCN3P51790 818 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 PTPN11Q06124 597 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-208ENST00000430669 ZNF268Q14587 947 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-208ENST00000430669 CYP4A22Q5TCH4 519 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 SLC35C1Q96A29 364 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 TRIM51Q9BSJ1 452 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 VAV3Q9UKW4 847 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 SCAF8Q9UPN6 1271 aaKnown RBP12.04□□□□□ -0.48
PTCH1-208ENST00000430669 COL24A1Q17RW2 1714 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 BFSP2Q13515 415 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 SLFN11Q7Z7L1 901 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 PARD3BQ8TEW8 1205 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 CDCA5Q96FF9 252 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 AAR2Q9Y312 384 aaKnown RBP12.04□□□□□ -0.48
PTCH1-208ENST00000430669 NCANO14594 1321 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 BAG2O95816 211 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 NAPEPLDQ6IQ20 393 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 MCOLN2Q8IZK6 566 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 PPTC7Q8NI37 304 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 ASTN1O14525 1302 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 LY75O60449 1722 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 MAP3K7O43318 606 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 INSRRP14616 1297 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 RBBP5Q15291 538 aaKnown RBP12.04□□□□□ -0.48
PTCH1-208ENST00000430669 TBCBQ99426 244 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 FAM49BQ9NUQ9 324 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 PCDHA3Q9Y5H8 950 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 RARGP13631 454 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 LSP1P33241 339 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 HADHAP40939 763 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 MIIPQ5JXC2 388 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 ATP6V0D2Q8N8Y2 350 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 GBP5Q96PP8 586 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 ZBTB18Q99592 522 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 INTS13Q9NVM9 706 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 KLHL11Q9NVR0 708 aa12.04□□□□□ -0.48
PTCH1-208ENST00000430669 A0A0G2JND7 137 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 AKR1A1P14550 325 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 CPB2Q96IY4 423 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 TRIM54Q9BYV2 358 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 SIK2Q9H0K1 926 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 WWP1Q9H0M0 922 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 SUN2Q9UH99 717 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 WTIPA6NIX2 430 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-208ENST00000430669 TCP11X1B4DZS4 312 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 CYB561D2O14569 222 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 ONECUT3O60422 494 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-208ENST00000430669 UBA1P22314 1058 aaKnown RBP12.03□□□□□ -0.48
PTCH1-208ENST00000430669 CTCFP49711 727 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-208ENST00000430669 LMCD1Q9NZU5 365 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 ARFGEF1Q9Y6D6 1849 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 TXNDC9O14530 226 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 ADCY1Q08828 1119 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 E2F5Q15329 346 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 KIZQ2M2Z5 673 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 KDM7AQ6ZMT4 941 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms