RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 NELL2Q99435 816 aa18.8■□□□□ 0.6
NUP50-208ENST00000430547 PHOX2BQ99453 314 aa18.8■□□□□ 0.6
NUP50-208ENST00000430547 DDX23Q9BUQ8 820 aaKnown RBP18.8■□□□□ 0.6
NUP50-208ENST00000430547 IL21Q9HBE4 155 aa18.8■□□□□ 0.6
NUP50-208ENST00000430547 LTB4R2Q9NPC1 389 aa18.8■□□□□ 0.6
NUP50-208ENST00000430547 MAPK8IP1Q9UQF2 711 aa18.8■□□□□ 0.6
NUP50-208ENST00000430547 TRAF3IP3Q9Y228 551 aa18.8■□□□□ 0.6
NUP50-208ENST00000430547 MYH10P35580 1976 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 FAM170BA6NMN3 283 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 MAN2B1O00754 1011 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 NCAM2O15394 837 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 ATP2C2O75185 946 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 TACC1O75410 805 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 STAU1O95793 577 aaKnown RBP18.79■□□□□ 0.6
NUP50-208ENST00000430547 CD72P21854 359 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 NR2F2P24468 414 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 DDX6P26196 483 aaKnown RBP eCLIP18.79■□□□□ 0.6
NUP50-208ENST00000430547 RPL13P26373 211 aaKnown RBP18.79■□□□□ 0.6
NUP50-208ENST00000430547 ANXA13P27216 316 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 AVPR1AP37288 418 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 NLRP12P59046 1061 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 NCOA4Q13772 614 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 CCDC142Q17RM4 750 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 ZNF667Q5HYK9 610 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 TDRD10Q5VZ19 366 aaKnown RBP18.79■□□□□ 0.6
NUP50-208ENST00000430547 FAM171BQ6P995 826 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 GPIHBP1Q8IV16 184 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 GUF1Q8N442 669 aaKnown RBP18.79■□□□□ 0.6
NUP50-208ENST00000430547 STKLD1Q8NE28 680 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 PLEKHO2Q8TD55 490 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 MRPL45Q9BRJ2 306 aaKnown RBP18.79■□□□□ 0.6
NUP50-208ENST00000430547 MKNK1Q9BUB5 465 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 OSBPL6Q9BZF3 934 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 GZF1Q9H116 711 aaPredicted RBP18.79■□□□□ 0.6
NUP50-208ENST00000430547 TRPV5Q9NQA5 729 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 RMND1Q9NWS8 449 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 OBP2AQ9NY56 170 aa18.79■□□□□ 0.6
NUP50-208ENST00000430547 KIF26AQ9ULI4 1882 aaPredicted RBP18.79■□□□□ 0.6
NUP50-208ENST00000430547 SLC38A8A6NNN8 435 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 CHADO15335 359 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 FAM163BP0C2L3 166 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 HMGA1P17096 107 aaKnown RBP18.78■□□□□ 0.6
NUP50-208ENST00000430547 GRIK1P39086 918 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 MAGEA9P43362 315 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 MAGEA11P43364 429 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 CLDN10P78369 228 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 ARHGAP29Q52LW3 1261 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 MDH1BQ5I0G3 518 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 VSTM1Q6UX27 236 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 MAB21L3Q8N8X9 362 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 TMC2Q8TDI7 906 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 TRMT2BQ96GJ1 504 aaKnown RBP18.78■□□□□ 0.6
NUP50-208ENST00000430547 CRTAC1Q9NQ79 661 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 HOOK1Q9UJC3 728 aaKnown RBP18.78■□□□□ 0.6
NUP50-208ENST00000430547 PIAS3Q9Y6X2 628 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 ANAPC1Q9H1A4 1944 aa18.78■□□□□ 0.6
NUP50-208ENST00000430547 NCANO14594 1321 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 A8MXQ7 604 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 LRRN2O75325 713 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 NOL4O94818 638 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 F11P03951 625 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 KRT13P13646 458 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 P4HA1P13674 534 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 BDNFP23560 247 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 WEE1P30291 646 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 FCHO2Q0JRZ9 810 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 CMTM8Q8IZV2 173 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 CELF5Q8N6W0 485 aaKnown RBP18.77■□□□□ 0.6
NUP50-208ENST00000430547 MYCBPAPQ8TBZ2 947 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 BPIFB1Q8TDL5 484 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 RSPRY1Q96DX4 576 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 PCED1BQ96HM7 432 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 XYLT2Q9H1B5 865 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 THG1LQ9NWX6 298 aaKnown RBP18.77■□□□□ 0.6
NUP50-208ENST00000430547 DLGAP2Q9P1A6 1054 aa18.77■□□□□ 0.6
NUP50-208ENST00000430547 HELZP42694 1942 aaKnown RBP18.76■□□□□ 0.59
NUP50-208ENST00000430547 IKBKBO14920 756 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 TRIM66O15016 1216 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 MAPK13O15264 365 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 PRAMEF12O95522 483 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 C4BPAP04003 597 aaKnown RBP18.76■□□□□ 0.59
NUP50-208ENST00000430547 TARSP26639 723 aaKnown RBP18.76■□□□□ 0.59
NUP50-208ENST00000430547 PIK3CAP42336 1068 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 VAMP7P51809 220 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 KPNA1P52294 538 aaPredicted RBP18.76■□□□□ 0.59
NUP50-208ENST00000430547 DLG4P78352 724 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 FAM160A1Q05DH4 1040 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 PNOCQ13519 176 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 NFIL3Q16649 462 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 SCARA5Q6ZMJ2 495 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 INTS8Q75QN2 995 aaKnown RBP18.76■□□□□ 0.59
NUP50-208ENST00000430547 C1orf210Q8IVY1 113 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 FAM186BQ8IYM0 893 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 FMR1NBQ8N0W7 255 aaPredicted RBP18.76■□□□□ 0.59
NUP50-208ENST00000430547 SLC46A2Q9BY10 475 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 IMPG2Q9BZV3 1241 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 VRTNQ9H8Y1 702 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 TRPC7Q9HCX4 862 aa18.76■□□□□ 0.59
NUP50-208ENST00000430547 SPATA6Q9NWH7 488 aaPredicted RBP18.76■□□□□ 0.59
NUP50-208ENST00000430547 EHD2Q9NZN4 543 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms