RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 NRCAMQ92823 1304 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 TRIP12Q14669 1992 aaPredicted RBP9.53□□□□□ -0.88
TDP1-202ENST00000393452 LRRD1A4D1F6 860 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 EBAG9O00559 213 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 RASGRF2O14827 1237 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 RGS16O15492 202 aaPredicted RBP9.53□□□□□ -0.88
TDP1-202ENST00000393452 TRAPPC3O43617 180 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 FAM107AO95990 144 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 F2P00734 622 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 IL1R2P27930 398 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 NDST1P52848 882 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 AUHQ13825 339 aaKnown RBP9.53□□□□□ -0.88
TDP1-202ENST00000393452 ZBTB6Q15916 424 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 KIZQ2M2Z5 673 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 KAZNQ674X7 775 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 LCLAT1Q6UWP7 414 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 ALLCQ8N6M5 410 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 SLC35B2Q8TB61 432 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 EPS8L3Q8TE67 593 aaKnown RBP9.53□□□□□ -0.88
TDP1-202ENST00000393452 KAT2BQ92831 832 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 CENPTQ96BT3 561 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 KIF12Q96FN5 646 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 DDX23Q9BUQ8 820 aaKnown RBP9.53□□□□□ -0.88
TDP1-202ENST00000393452 ADAM7Q9H2U9 754 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 SLC5A4Q9NY91 659 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 SMIM35A0A1B0GVV1 85 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 M0QYV0 167 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 TCEA3O75764 348 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 ITGAVP06756 1048 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 CYP3A5P20815 502 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 VPS41P49754 854 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 SEC24CP53992 1094 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 VCPP55072 806 aaKnown RBP9.52□□□□□ -0.88
TDP1-202ENST00000393452 C1QTNF8P60827 252 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 ADAM17P78536 824 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 MORN1Q5T089 497 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 ZFYVE27Q5T4F4 411 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 IZUMO3Q5VZ72 239 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 SLC27A1Q6PCB7 646 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 APBB1IPQ7Z5R6 666 aaPredicted RBP9.52□□□□□ -0.88
TDP1-202ENST00000393452 NLRP14Q86W24 1093 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 C2orf69Q8N8R5 385 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 GLIS1Q8NBF1 620 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 SNX27Q96L92 541 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 HEXIM2Q96MH2 286 aaKnown RBP9.52□□□□□ -0.88
TDP1-202ENST00000393452 SERPINB12Q96P63 405 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 CCT8L2Q96SF2 557 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 GCOM2Q9BZD3 368 aaPredicted RBP9.52□□□□□ -0.88
TDP1-202ENST00000393452 RABEP2Q9H5N1 569 aa9.52□□□□□ -0.88
TDP1-202ENST00000393452 METTL5Q9NRN9 209 aaKnown RBP9.52□□□□□ -0.88
TDP1-202ENST00000393452 TLDC2A0PJX2 215 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 ACSL3O95573 720 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 PFKMP08237 780 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 SMIM10L2AP0DMW4 78 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 SMIM10L2BP0DMW5 78 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 IFI35P80217 286 aaPredicted RBP9.52□□□□□ -0.89
TDP1-202ENST00000393452 MYO1EQ12965 1108 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 STILQ15468 1287 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 HADHQ16836 314 aaKnown RBP9.52□□□□□ -0.89
TDP1-202ENST00000393452 P3H1Q32P28 736 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 ALKAL1Q6UXT8 129 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 BBS12Q6ZW61 710 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 ZCCHC9Q8N567 271 aaKnown RBP9.52□□□□□ -0.89
TDP1-202ENST00000393452 EMC1Q8N766 993 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 ZNF784Q8NCA9 323 aaPredicted RBP9.52□□□□□ -0.89
TDP1-202ENST00000393452 CMASQ8NFW8 434 aaPredicted RBP9.52□□□□□ -0.89
TDP1-202ENST00000393452 UHMK1Q8TAS1 419 aaKnown RBP9.52□□□□□ -0.89
TDP1-202ENST00000393452 ACSF2Q96CM8 615 aaPredicted RBP9.52□□□□□ -0.89
TDP1-202ENST00000393452 ZMAT2Q96NC0 199 aaKnown RBP9.52□□□□□ -0.89
TDP1-202ENST00000393452 NT5C1AQ9BXI3 368 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 FRMD8P1Q9BZ68 369 aaPredicted RBP9.52□□□□□ -0.89
TDP1-202ENST00000393452 STMN4Q9H169 189 aaPredicted RBP9.52□□□□□ -0.89
TDP1-202ENST00000393452 CXCL16Q9H2A7 254 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 SYNCQ9H7C4 482 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 ZNF148Q9UQR1 794 aa9.52□□□□□ -0.89
TDP1-202ENST00000393452 GMNCA6NCL1 334 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 E7EVH7 732 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 MYO1CO00159 1063 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 DNALI1O14645 258 aaPredicted RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 DYNC1LI2O43237 492 aaPredicted RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 CELF2O95319 508 aaKnown RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 NPTXRO95502 500 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 DARSP14868 501 aaKnown RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 KDELR1P24390 212 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 PCK1P35558 622 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 CDR1P51861 262 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 KYNUQ16719 465 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 CCDC142Q17RM4 750 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 SKIDA1Q1XH10 827 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 PKDCCQ504Y2 493 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 ERMARDQ5T6L9 678 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 NOTUMQ6P988 496 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 CEP128Q6ZU80 1094 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 GSTA5Q7RTV2 222 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 PRUNE1Q86TP1 453 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 LRRC52Q8N7C0 313 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 IPO4Q8TEX9 1081 aaKnown RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 ZNF473Q8WTR7 871 aaKnown RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 FAM49AQ9H0Q0 323 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms