RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 MZT2AQ6P582 158 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 CCDC80Q76M96 950 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 NAT9Q9BTE0 207 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 ZNF304Q9HCX3 659 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 AHSPQ9NZD4 102 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 PIM2Q9P1W9 311 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 VWA5AO00534 786 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 EIF2S3P41091 472 aaKnown RBP15.29■□□□□ 0.04
CCDC50-201ENST00000392455 PTGES3Q15185 160 aaKnown RBP15.29■□□□□ 0.04
CCDC50-201ENST00000392455 CYP51A1Q16850 503 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 RAD54LQ92698 747 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 COPS7BQ9H9Q2 264 aaPredicted RBP15.29■□□□□ 0.04
CCDC50-201ENST00000392455 LAMC1P11047 1609 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 CCDC162PA2VCL2 907 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 TRIM49BA6NDI0 452 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 SLC2A3P11169 496 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 HOXB6P17509 224 aaKnown RBP15.29■□□□□ 0.04
CCDC50-201ENST00000392455 ITIH2P19823 946 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 ARSEP51690 589 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 RPS7P62081 194 aaKnown RBP15.29■□□□□ 0.04
CCDC50-201ENST00000392455 ANKRD40Q6AI12 368 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 ACAD9Q9H845 621 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 HSPBP1Q9NZL4 362 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 STOML2Q9UJZ1 356 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 GSTK1Q9Y2Q3 226 aa15.29■□□□□ 0.04
CCDC50-201ENST00000392455 LARGE1O95461 756 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 PJA1Q8NG27 643 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 NLNQ9BYT8 704 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 EPB41L4BQ9H329 900 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 BTBD3Q9Y2F9 522 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 NPHP4O75161 1426 aaPredicted RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 CD3EAPO15446 510 aaKnown RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 YWHABP31946 246 aaKnown RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 EFNA5P52803 228 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 TTLL4Q14679 1199 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 CCNJLQ8IV13 435 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 KCNV2Q8TDN2 545 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 RFFLQ8WZ73 363 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 LGALS16A8MUM7 142 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 SEMA3DO95025 777 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 BCL10O95999 233 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 TTKP33981 857 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 PDK1Q15118 436 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 SMAD1Q15797 465 aaKnown RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 ELOA2Q8IYF1 753 aaPredicted RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 AP3S1Q92572 193 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 THTPAQ9BU02 230 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 BCL2L14Q9BZR8 327 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 KLHL11Q9NVR0 708 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 HEATR9A2RTY3 570 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 NPR3P17342 541 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 NSL1Q96IY1 281 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 ZNF668Q96K58 619 aaPredicted RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 STK33Q9BYT3 514 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 RIBC2Q9H4K1 309 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 SLC38A7Q9NVC3 462 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 ADORA2BP29275 332 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 ALDH1A3P47895 512 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 HNRNPH2P55795 449 aaKnown RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 ABRAXAS1Q6UWZ7 409 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 CCDC81Q6ZN84 652 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 CENPLQ8N0S6 344 aaPredicted RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 SNIP1Q8TAD8 396 aaKnown RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP6P35125 1406 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 VAMP7P51809 220 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 RCAN1P53805 252 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 COASYQ13057 564 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 C18orf25Q96B23 403 aaPredicted RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 FLT1P17948 1338 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP17L15C9J2P7 530 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP17L13C9JLJ4 530 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP17L11C9JVI0 530 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP17L18D6R9N7 530 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP17L22D6RA61 530 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP17L17D6RBQ6 530 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP17L19D6RCP7 530 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP17L20D6RJB6 530 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 ASMTLO95671 621 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 CNTFP26441 200 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP17L24Q0WX57 530 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 USP17L6PQ6QN14 398 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 C1orf50Q9BV19 199 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 FAM192AQ9GZU8 254 aa15.28■□□□□ 0.04
CCDC50-201ENST00000392455 ABI2Q9NYB9 513 aaPredicted RBP15.28■□□□□ 0.04
CCDC50-201ENST00000392455 IZUMO3Q5VZ72 239 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 FAM20AQ96MK3 541 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 POLR3FQ9H1D9 316 aaPredicted RBP15.27■□□□□ 0.04
CCDC50-201ENST00000392455 PCSK1NQ9UHG2 260 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 CAND2O75155 1236 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 CCNA2P20248 432 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 GCLCP48506 637 aaPredicted RBP15.27■□□□□ 0.04
CCDC50-201ENST00000392455 RUNDC3AQ59EK9 446 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 SPATA33Q96N06 139 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 PAK5Q9P286 719 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 NMT2O60551 498 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 ATP9AO75110 1047 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 RTN2O75298 545 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 CCNG2Q16589 344 aa15.27■□□□□ 0.04
CCDC50-201ENST00000392455 DDX53Q86TM3 631 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms