RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 NXF1Q9UBU9 619 aaKnown RBP9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 MTUS1Q9ULD2 1270 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 ATRNL1Q5VV63 1379 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 MYO3BQ8WXR4 1341 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 RBBP6Q7Z6E9 1792 aaKnown RBP9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 HTR3EA5X5Y0 456 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 LRRIQ4A6NIV6 560 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 CDH16O75309 829 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 UQCRBP14927 111 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 PGM1P36871 562 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 HADHBP55084 474 aaKnown RBP9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 BTKQ06187 659 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 PEX6Q13608 980 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 ABCB5Q2M3G0 1257 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 CASC4Q6P4E1 433 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 POTEAQ6S8J7 498 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 TMEM110Q86TL2 294 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 ARHGEF19Q8IW93 802 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 AGR3Q8TD06 166 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 DHX38Q92620 1227 aaKnown RBP9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 SHCBP1LQ9BZQ2 653 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 STMN4Q9H169 189 aaPredicted RBP9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 TRAF3IP3Q9Y228 551 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 WDR37Q9Y2I8 494 aa9.17□□□□□ -0.94
SMARCA1-203ENST00000371123 C15orf38-AP3S2A0A0A6YYH1 394 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 F5H6K3 240 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 H3BRJ5 948 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 FCHO1O14526 889 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 FSCN2O14926 492 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 HNRNPDLO14979 420 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 ADRA2BP18089 450 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 KLRC2P26717 231 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 RPL10P27635 214 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 CHRNA5P30532 468 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 ECE1P42892 770 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 GEMIN4P57678 1058 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 PTK6Q13882 451 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 MSS51Q4VC12 460 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 SMUG1Q53HV7 270 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 SGO2Q562F6 1265 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 PLA2G4FQ68DD2 849 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 CDHR3Q6ZTQ4 885 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 ARPINQ7Z6K5 226 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 CPA5Q8WXQ8 436 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 DDX27Q96GQ7 796 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 C11orf70Q9BRQ4 267 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 FHDC1Q9C0D6 1143 aaPredicted RBP9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 USP21Q9UK80 565 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 DOLKQ9UPQ8 538 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 DIS3Q9Y2L1 958 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 ZNF711Q9Y462 761 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 TIMM22Q9Y584 194 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 CLUHO75153 1309 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 E9PBE3 544 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 ETV4P43268 484 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 DLG4P78352 724 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 ALCAMQ13740 583 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 CDO1Q16878 200 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 C11orf63Q6NUN7 778 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 RINT1Q6NUQ1 792 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 SLC2A7Q6PXP3 512 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 BBS5Q8N3I7 341 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 PPP1R36Q96LQ0 422 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 NEURL2Q9BR09 285 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 SIKE1Q9BRV8 207 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 IQCGQ9H095 443 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 SYNGAP1Q96PV0 1343 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 A0A1W2PQ67 120 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 OPHN1O60890 802 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 HAUS5O94927 633 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 FUCA1P04066 466 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 GSTT2P0CG29 244 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 GSTT2BP0CG30 244 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 FDX1P10109 184 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 HALP42357 657 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 GJA8P48165 433 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 CDKL1Q00532 357 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 CDK16Q00536 496 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 APOFQ13790 326 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 BCL2A1Q16548 175 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 C3orf62Q6ZUJ4 267 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 FRMD5Q7Z6J6 570 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 UBL4BQ8N7F7 174 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 HSPH1Q92598 858 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 CLIP3Q96DZ5 547 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 RUNDC3BQ96NL0 473 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 LRRC4BQ9NT99 713 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 PCSK1NQ9UHG2 260 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 KAT6AQ92794 2004 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 SNED1Q8TER0 1413 aa9.16□□□□□ -0.94
SMARCA1-203ENST00000371123 CAPN8A6NHC0 703 aa9.15□□□□□ -0.94
SMARCA1-203ENST00000371123 B2RBV5 119 aa9.15□□□□□ -0.94
SMARCA1-203ENST00000371123 DNAJA2O60884 412 aa9.15□□□□□ -0.94
SMARCA1-203ENST00000371123 GAS8O95995 478 aa9.15□□□□□ -0.94
SMARCA1-203ENST00000371123 MLH1P40692 756 aa9.15□□□□□ -0.94
SMARCA1-203ENST00000371123 KLF1Q13351 362 aaPredicted RBP9.15□□□□□ -0.94
SMARCA1-203ENST00000371123 PRKD1Q15139 912 aaPredicted RBP9.15□□□□□ -0.94
SMARCA1-203ENST00000371123 KBTBD12Q3ZCT8 623 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms