RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ASPAP45381 313 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 PWP2Q15269 919 aaKnown RBP16.01■□□□□ 0.15
DDX56-201ENST00000258772 SURF1Q15526 300 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 SMTNL2Q2TAL5 461 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 ZNF699Q32M78 642 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 KCNT1Q5JUK3 1230 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 HHATQ5VTY9 493 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 ANKRD22Q5VYY1 191 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 DENND1BQ6P3S1 775 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 PPIL6Q8IXY8 311 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 KIAA0319LQ8IZA0 1049 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 CHST13Q8NET6 341 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 JOSD2Q8TAC2 188 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 PYROXD1Q8WU10 500 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 CPT1BQ92523 772 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 ERP27Q96DN0 273 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 LRRC37BQ96QE4 947 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 XYLT2Q9H1B5 865 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 ABLIM1O14639 778 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 ATP5HO75947 161 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 KRT7P08729 469 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 HOXC6P09630 235 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 SRGAP2CP0DJJ0 459 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 KDELR1P24390 212 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 SSTR1P30872 391 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 POLR2BP30876 1174 aaKnown RBP16.01■□□□□ 0.15
DDX56-201ENST00000258772 MYO1EQ12965 1108 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 TFDP1Q14186 410 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 MSS51Q4VC12 460 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 FNBP1LQ5T0N5 605 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 FAM160B1Q5W0V3 765 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 BBS12Q6ZW61 710 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 VSIG1Q86XK7 387 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 NAT8LQ8N9F0 302 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 TTC13Q8NBP0 860 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 FRMD8P1Q9BZ68 369 aaPredicted RBP16.01■□□□□ 0.15
DDX56-201ENST00000258772 PHACTR1Q9C0D0 580 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 TJP2Q9UDY2 1190 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 FETUBQ9UGM5 382 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 CYTH4Q9UIA0 394 aa16.01■□□□□ 0.15
DDX56-201ENST00000258772 ZMYND8Q9ULU4 1186 aaPredicted RBP16.01■□□□□ 0.15
DDX56-201ENST00000258772 KRT4P19013 534 aa16■□□□□ 0.15
DDX56-201ENST00000258772 PHBP35232 272 aa16■□□□□ 0.15
DDX56-201ENST00000258772 ARL4CP56559 192 aa16■□□□□ 0.15
DDX56-201ENST00000258772 YWHAEP62258 255 aaKnown RBP16■□□□□ 0.15
DDX56-201ENST00000258772 LACTBP83111 547 aaPredicted RBP16■□□□□ 0.15
DDX56-201ENST00000258772 HADHQ16836 314 aaKnown RBP16■□□□□ 0.15
DDX56-201ENST00000258772 IER5Q5VY09 327 aa16■□□□□ 0.15
DDX56-201ENST00000258772 CDCA2Q69YH5 1023 aaPredicted RBP16■□□□□ 0.15
DDX56-201ENST00000258772 LVRNQ6Q4G3 990 aa16■□□□□ 0.15
DDX56-201ENST00000258772 C3orf62Q6ZUJ4 267 aa16■□□□□ 0.15
DDX56-201ENST00000258772 LHX5Q9H2C1 402 aa16■□□□□ 0.15
DDX56-201ENST00000258772 SSU72Q9NP77 194 aaKnown RBP16■□□□□ 0.15
DDX56-201ENST00000258772 C15orf41Q9Y2V0 281 aa16■□□□□ 0.15
DDX56-201ENST00000258772 MGAMO43451 1857 aa16■□□□□ 0.15
DDX56-201ENST00000258772 ITGBL1O95965 494 aaPredicted RBP16■□□□□ 0.15
DDX56-201ENST00000258772 PRKCBP05771 671 aa16■□□□□ 0.15
DDX56-201ENST00000258772 RPSAP08865 295 aaKnown RBP16■□□□□ 0.15
DDX56-201ENST00000258772 FGFR1P11362 822 aa16■□□□□ 0.15
DDX56-201ENST00000258772 CD19P15391 556 aa16■□□□□ 0.15
DDX56-201ENST00000258772 RXRBP28702 533 aa16■□□□□ 0.15
DDX56-201ENST00000258772 ALDH3A1P30838 453 aa16■□□□□ 0.15
DDX56-201ENST00000258772 RPL22P35268 128 aaKnown RBP16■□□□□ 0.15
DDX56-201ENST00000258772 TCF7P36402 384 aaPredicted RBP16■□□□□ 0.15
DDX56-201ENST00000258772 LAMTOR4Q0VGL1 99 aa16■□□□□ 0.15
DDX56-201ENST00000258772 TAZQ16635 292 aa16■□□□□ 0.15
DDX56-201ENST00000258772 MAPK6Q16659 721 aa16■□□□□ 0.15
DDX56-201ENST00000258772 ZC3H12AQ5D1E8 599 aaKnown RBP16■□□□□ 0.15
DDX56-201ENST00000258772 ADGRD1Q6QNK2 874 aa16■□□□□ 0.15
DDX56-201ENST00000258772 THNSL1Q8IYQ7 743 aa16■□□□□ 0.15
DDX56-201ENST00000258772 ATP11CQ8NB49 1132 aa16■□□□□ 0.15
DDX56-201ENST00000258772 RNF149Q8NC42 400 aa16■□□□□ 0.15
DDX56-201ENST00000258772 FNIP1Q8TF40 1166 aa16■□□□□ 0.15
DDX56-201ENST00000258772 NSMCE1Q8WV22 266 aa16■□□□□ 0.15
DDX56-201ENST00000258772 ZNF75CPQ92670 426 aaPredicted RBP16■□□□□ 0.15
DDX56-201ENST00000258772 UTP4Q969X6 686 aaKnown RBP16■□□□□ 0.15
DDX56-201ENST00000258772 RAB3IPQ96QF0 476 aaPredicted RBP16■□□□□ 0.15
DDX56-201ENST00000258772 NOP53Q9NZM5 478 aaKnown RBP16■□□□□ 0.15
DDX56-201ENST00000258772 DCTN3O75935 186 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 EFTUD2Q15029 972 aaKnown RBP eCLIP15.99■□□□□ 0.157e-7■■■■□ 22.7
DDX56-201ENST00000258772 RHPN2Q8IUC4 686 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 C10orf82Q8WW14 230 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 RSAD2Q8WXG1 361 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 SEPT1Q8WYJ6 367 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 KLRG1Q96E93 195 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 WDR83Q9BRX9 315 aaKnown RBP15.99■□□□□ 0.15
DDX56-201ENST00000258772 NXF1Q9UBU9 619 aaKnown RBP15.99■□□□□ 0.15
DDX56-201ENST00000258772 AFG3L2Q9Y4W6 797 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 GJA3Q9Y6H8 435 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 LOC285556D6RIA3 1793 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 E7ESA3 106 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 NFKBIEO00221 500 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 PEX10O60683 326 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 ZWINTO95229 277 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 CD48P09326 243 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 GBP2P32456 591 aaPredicted RBP15.99■□□□□ 0.15
DDX56-201ENST00000258772 PSMC1P62191 440 aaKnown RBP15.99■□□□□ 0.15
DDX56-201ENST00000258772 ATP11AP98196 1134 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 PARP6Q2NL67 630 aa15.99■□□□□ 0.15
DDX56-201ENST00000258772 OTOAQ7RTW8 1153 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms