RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SNX8Q9Y5X2 465 aa11.52□□□□□ -0.56
MSH6-201ENST00000234420 SNAP23O00161 211 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 ITGA3P26006 1051 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 GUCY1A2P33402 732 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 DDX39BQ13838 428 aaKnown RBP11.52□□□□□ -0.57
MSH6-201ENST00000234420 NEDD8Q15843 81 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 C17orf50Q8WW18 174 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 WDR24Q96S15 920 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 TMEM79Q9BSE2 394 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 RHBGQ9H310 441 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 EPS8L2Q9H6S3 715 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 CDYLQ9Y232 598 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 NCF1BA6NI72 391 aaPredicted RBP11.52□□□□□ -0.57
MSH6-201ENST00000234420 NCF1CA8MVU1 366 aaPredicted RBP11.52□□□□□ -0.57
MSH6-201ENST00000234420 PSMD12O00232 456 aaPredicted RBP11.52□□□□□ -0.57
MSH6-201ENST00000234420 NCF1P14598 390 aaPredicted RBP11.52□□□□□ -0.57
MSH6-201ENST00000234420 AASDHQ4L235 1098 aaPredicted RBP11.52□□□□□ -0.57
MSH6-201ENST00000234420 GLRA4Q5JXX5 417 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 FAM81AQ8TBF8 368 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 WNK4Q96J92 1243 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 DSCC1Q9BVC3 393 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 TMEM206Q9H813 350 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 TSPAN4O14817 238 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 TEX28O15482 410 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 NDUFV1P49821 464 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 TPI1P60174 286 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 TMEM132BQ14DG7 1078 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 HEATR6Q6AI08 1181 aaKnown RBP11.52□□□□□ -0.57
MSH6-201ENST00000234420 SLC25A24Q6NUK1 477 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 FAM124AQ86V42 546 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 SYTL5Q8TDW5 730 aaPredicted RBP11.52□□□□□ -0.57
MSH6-201ENST00000234420 ADAM30Q9UKF2 790 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 GRID2IPA4D2P6 1211 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 TBX3O15119 743 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 NMT2O60551 498 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 ASS1P00966 412 aaKnown RBP11.52□□□□□ -0.57
MSH6-201ENST00000234420 NAALADL2Q58DX5 795 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 LCORLQ8N3X6 602 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 MRPL4Q9BYD3 311 aaKnown RBP11.52□□□□□ -0.57
MSH6-201ENST00000234420 VCPKMTQ9H867 229 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 PLEKHA5Q9HAU0 1116 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 MAGEF1Q9HAY2 307 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 TUFT1Q9NNX1 390 aa11.52□□□□□ -0.57
MSH6-201ENST00000234420 THOC2Q8NI27 1593 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 USP17L15C9J2P7 530 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 USP17L13C9JLJ4 530 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 USP17L11C9JVI0 530 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 USP17L18D6R9N7 530 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 USP17L22D6RA61 530 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 USP17L17D6RBQ6 530 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 USP17L19D6RCP7 530 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 USP17L20D6RJB6 530 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 KLHL41O60662 606 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 PGM3O95394 542 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 USP17L24Q0WX57 530 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 STAT4Q14765 748 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 USP17L6PQ6QN14 398 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 CCDC17Q96LX7 622 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 GLT1D1Q96MS3 346 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 TRIM49BA6NDI0 452 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 MOXD2PA6NHM9 499 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 TRIM49D1C9J1S8 452 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 AKR1B1P15121 316 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 MXI1P50539 228 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 MTTPP55157 894 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 FNDC3BQ53EP0 1204 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 IZUMO1Q8IYV9 350 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 KRT78Q8N1N4 520 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 ELMO2Q96JJ3 720 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 PRRG4Q9BZD6 226 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 RNF208Q9H0X6 261 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 PIGUQ9H490 435 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 VTA1Q9NP79 307 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 CYP26B1Q9NR63 512 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 TMEM120BA0PK00 339 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 ANO9A1A5B4 782 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 MIF4GDA9UHW6 222 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 ZNF24P17028 368 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 PSMA4P25789 261 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 ARSEP51690 589 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 PTPN12Q05209 780 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 TRAF2Q12933 501 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 GLB1LQ6UWU2 654 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 KIAA1324Q6UXG2 1013 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 TNIP2Q8NFZ5 429 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 WDR36Q8NI36 951 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 KCNS3Q9BQ31 491 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 OSBPL8Q9BZF1 889 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 AVENQ9NQS1 362 aaPredicted RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 STARD7Q9NQZ5 370 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 PSD3Q9NYI0 1048 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 SMG5Q9UPR3 1016 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 CTTNBP2Q8WZ74 1663 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 ZNF197O14709 1029 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 EIF2S3P41091 472 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 BTN3A2P78410 334 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 EIF2B5Q13144 721 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 ZNF512BQ96KM6 892 aaPredicted RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 TRAPPC9Q96Q05 1148 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms