RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 GAB4Q2WGN9 574 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 MAP7D1Q3KQU3 841 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 SLCO6A1Q86UG4 719 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 SYT12Q8IV01 421 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 DAW1Q8N136 415 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 GLIS3Q8NEA6 775 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 NACC1Q96RE7 527 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 SLC22A12Q96S37 553 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 CYP2S1Q96SQ9 504 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 SEPT5Q99719 369 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-212ENST00000641247 GTPBP2Q9BX10 602 aaKnown RBP10.54□□□□□ -0.72
PHGDH-212ENST00000641247 NUSAP1Q9BXS6 441 aaKnown RBP10.54□□□□□ -0.72
PHGDH-212ENST00000641247 CCDC86Q9H6F5 360 aaKnown RBP10.54□□□□□ -0.72
PHGDH-212ENST00000641247 TUFT1Q9NNX1 390 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 ZDHHC4Q9NPG8 344 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 FOXD4L1Q9NU39 408 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 PILRBQ9UKJ0 227 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-212ENST00000641247 WNT6Q9Y6F9 365 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 ATG2BQ96BY7 2078 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 FREM2Q5SZK8 3169 aa10.54□□□□□ -0.72
PHGDH-212ENST00000641247 ASH1LQ9NR48 2969 aaKnown RBP10.53□□□□□ -0.72
PHGDH-212ENST00000641247 KIF26AQ9ULI4 1882 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-212ENST00000641247 ASCC3Q8N3C0 2202 aaKnown RBP10.53□□□□□ -0.72
PHGDH-212ENST00000641247 CPLX1O14810 134 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 SH3BP5O60239 455 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 TADA3O75528 432 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 CTDNEP1O95476 244 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 MCF2P10911 925 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 FDPSP14324 419 aaKnown RBP10.53□□□□□ -0.72
PHGDH-212ENST00000641247 CDC25CP30307 473 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 OPRD1P41143 372 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 NPTX2P47972 431 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 EFNA5P52803 228 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 PEX3P56589 373 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 NLRP12P59046 1061 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 MYBPC2Q14324 1141 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 CRY1Q16526 586 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 EML3Q32P44 896 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 MGAT5BQ3V5L5 792 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 EMC10Q5UCC4 262 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 SDHAF4Q5VUM1 108 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 PEAR1Q5VY43 1037 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-212ENST00000641247 OVOS1Q6IE37 1185 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 ITIH5Q86UX2 942 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 C11orf74Q86VG3 221 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 TTC30AQ86WT1 665 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 FAM177A1Q8N128 213 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-212ENST00000641247 LRRC15Q8TF66 581 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 ADAMTS14Q8WXS8 1223 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 ACDQ96AP0 544 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 ZNF274Q96GC6 653 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-212ENST00000641247 NAP1L4Q99733 375 aaKnown RBP10.53□□□□□ -0.72
PHGDH-212ENST00000641247 TDP1Q9NUW8 608 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 CHMP5Q9NZZ3 219 aa10.53□□□□□ -0.72
PHGDH-212ENST00000641247 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-212ENST00000641247 ARHGEF35A5YM69 484 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 CCDC169A6NNP5 214 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 BTBD18B2RXH4 712 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 PFKFB2O60825 505 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 FGF19O95750 216 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 FTH1P19P0C7X4 201 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 CXCL8P10145 99 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 TYMPP19971 482 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 AVPR1AP37288 418 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 TNFSF9P41273 254 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 ZXDBP98169 803 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 BFSP1Q12934 665 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 DMP1Q13316 513 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-212ENST00000641247 MTF1Q14872 753 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 PPP2R5AQ15172 486 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 TRIP6Q15654 476 aaKnown RBP10.52□□□□□ -0.73
PHGDH-212ENST00000641247 ZNF423Q2M1K9 1284 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 SLC39A12Q504Y0 691 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 ZC2HC1CQ53FD0 456 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-212ENST00000641247 DSTYKQ6XUX3 929 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 LPCAT2Q7L5N7 544 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 USP37Q86T82 979 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 CCDC83Q8IWF9 413 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 NECAB1Q8N987 351 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 OSCP1Q8WVF1 389 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 GTF3C6Q969F1 213 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 TCHPQ9BT92 498 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 ZCWPW1Q9H0M4 648 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 TMEM134Q9H6X4 195 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 CAPN10Q9HC96 672 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 TMLHEQ9NVH6 421 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 DUS2Q9NX74 493 aaKnown RBP10.52□□□□□ -0.73
PHGDH-212ENST00000641247 ARHGAP28Q9P2N2 729 aa10.52□□□□□ -0.73
PHGDH-212ENST00000641247 PCNX2A6NKB5 2137 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 SFI1A8K8P3 1242 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 SGK1O00141 431 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 GJB3O75712 270 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 CFIP05156 583 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 HAPLN1P10915 354 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-212ENST00000641247 RPA1P27694 616 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 SLC6A11P48066 632 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 TUFMP49411 452 aaKnown RBP10.51□□□□□ -0.73
PHGDH-212ENST00000641247 LILRA4P59901 499 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 AMPD2Q01433 879 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms