RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 ZNF460Q14592 562 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 IQCB1Q15051 598 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 C4orf17Q53FE4 359 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 CT47A1Q5JQC4 288 aaPredicted RBP5.34□□□□□ -1.55
SYCP1-209ENST00000613524 SDHAF4Q5VUM1 108 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 DSTYKQ6XUX3 929 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 PRICKLE2Q7Z3G6 844 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.34□□□□□ -1.55
SYCP1-209ENST00000613524 HACE1Q8IYU2 909 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 PDCL2Q8N4E4 241 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 LINC01465Q8N7H1 131 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 COLGALT1Q8NBJ5 622 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 ING5Q8WYH8 240 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 PGBD4Q96DM1 585 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 AK8Q96MA6 479 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 ACO2Q99798 780 aaKnown RBP5.34□□□□□ -1.55
SYCP1-209ENST00000613524 C11orf84Q9BUA3 381 aaPredicted RBP5.34□□□□□ -1.55
SYCP1-209ENST00000613524 SLC4A5Q9BY07 1137 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 C2orf40Q9H1Z8 148 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 SLITRK6Q9H5Y7 841 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 RPF1Q9H9Y2 349 aaKnown RBP5.34□□□□□ -1.55
SYCP1-209ENST00000613524 SPG21Q9NZD8 308 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 AGO2Q9UKV8 859 aaKnown RBP5.34□□□□□ -1.55
SYCP1-209ENST00000613524 HRH3Q9Y5N1 445 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 MTCH2Q9Y6C9 303 aa5.34□□□□□ -1.55
SYCP1-209ENST00000613524 XYLBO75191 536 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 GALTP07902 379 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 IL9P15248 144 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 LIG3P49916 1009 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 ARSJQ5FYB0 599 aaPredicted RBP5.34□□□□□ -1.56
SYCP1-209ENST00000613524 JADE1Q6IE81 842 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 PPP4R4Q6NUP7 873 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 SLC22A17Q8WUG5 538 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 CACTINQ8WUQ7 758 aaKnown RBP5.34□□□□□ -1.56
SYCP1-209ENST00000613524 HS3ST6Q96QI5 342 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 LPIN3Q9BQK8 851 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 MTMR12Q9C0I1 747 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 MAF1Q9H063 256 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 TMEM117Q9H0C3 514 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 DNAJC25Q9H1X3 360 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 PIDD1Q9HB75 910 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 TLR9Q9NR96 1032 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 RCOR1Q9UKL0 485 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 CORINQ9Y5Q5 1042 aa5.34□□□□□ -1.56
SYCP1-209ENST00000613524 SMIM28A0A1B0GU29 152 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 A0A1B0GUA9 196 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 A0A1W2PP55 124 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 PTGESO14684 152 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 ADAM12O43184 909 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 EFCAB14O75071 495 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 LRRN2O75325 713 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 URODP06132 367 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 MAPTP10636 758 aaKnown RBP5.33□□□□□ -1.56
SYCP1-209ENST00000613524 CPB1P15086 417 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 RHOQP17081 205 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 TKTP29401 623 aaKnown RBP5.33□□□□□ -1.56
SYCP1-209ENST00000613524 CDC25BP30305 580 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 ID4P47928 161 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 NTHL1P78549 312 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 SYCP1Q15431 976 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 RESP18Q5W5W9 173 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 MPZL3Q6UWV2 235 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 SPPL3Q8TCT6 385 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 DNAJC19Q96DA6 116 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 PYM1Q9BRP8 204 aaKnown RBP5.33□□□□□ -1.56
SYCP1-209ENST00000613524 PI4K2AQ9BTU6 479 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 CCSER1Q9C0I3 900 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 AAASQ9NRG9 546 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 RBAKQ9NYW8 714 aaPredicted RBP5.33□□□□□ -1.56
SYCP1-209ENST00000613524 MAGED2Q9UNF1 606 aaPredicted RBP5.33□□□□□ -1.56
SYCP1-209ENST00000613524 GPR179Q6PRD1 2367 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 SMTNL1A8MU46 457 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 N4BP3O15049 544 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 TSPAN6O43657 245 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 PPP6R2O75170 966 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 LYPLA2O95372 231 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 RPN1P04843 607 aaKnown RBP5.33□□□□□ -1.56
SYCP1-209ENST00000613524 ITGB3P05106 788 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 TMEM191BP0C7N4 346 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 CD58P19256 250 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 GRIA2P42262 883 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 ZNF165P49910 485 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 EFNA5P52803 228 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 PSMC1P62191 440 aaKnown RBP5.33□□□□□ -1.56
SYCP1-209ENST00000613524 PPP2R3AQ06190 1150 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 POSTNQ15063 836 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 RTP2Q5QGT7 225 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 TMEM214Q6NUQ4 689 aaKnown RBP5.33□□□□□ -1.56
SYCP1-209ENST00000613524 CNNM4Q6P4Q7 775 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 SLC39A4Q6P5W5 647 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 SARM1Q6SZW1 724 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 C11orf57Q6ZUT1 292 aaPredicted RBP5.33□□□□□ -1.56
SYCP1-209ENST00000613524 ZNF720Q7Z2F6 126 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 USP37Q86T82 979 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 LSRQ86X29 649 aaPredicted RBP5.33□□□□□ -1.56
SYCP1-209ENST00000613524 TTC8Q8TAM2 541 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 PARD3BQ8TEW8 1205 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 FNBP1Q96RU3 617 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 SEZ6LQ9BYH1 1024 aa5.33□□□□□ -1.56
SYCP1-209ENST00000613524 FZD8Q9H461 694 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms